Detailed information NTG0394965

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: GAY96_RS02485
• Genome accession: NZ_CP045550
• Coordinates: 485864..487183 (-)
• Length: 439 a.a.
• NCBI ID: WP_265574174.1
• Uniprot ID: -
• Organism: Venatoribacter cucullus strain ASxS5
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 480864..492183

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GAY96_RS02470 (GAY96_02445)	-	481288..484431 (-)	3144	WP_265574172.1	PilC/PilY family type IV pilus protein	-
GAY96_RS02475 (GAY96_02450)	-	484478..485038 (-)	561	WP_228345936.1	pilus assembly PilX family protein	-
GAY96_RS02480 (GAY96_02455)	-	485179..485727 (-)	549	WP_265574173.1	GspH/FimT family pseudopilin	-
GAY96_RS02485 (GAY96_02460)	pilR	485864..487183 (-)	1320	WP_265574174.1	sigma-54-dependent transcriptional regulator	Regulator
GAY96_RS02490 (GAY96_02465)	-	487180..488733 (-)	1554	WP_265574175.1	sensor histidine kinase	-
GAY96_RS02495 (GAY96_02470)	-	488828..490450 (+)	1623	WP_265574176.1	NAD+ synthase	-
GAY96_RS02500 (GAY96_02475)	-	490533..491354 (-)	822	WP_228345941.1	outer membrane protein assembly factor BamD	-

Sequence

Protein

• Length: 439 a.a.
• Molecular weight: 48997.16 Da
• Isoelectric Point: 5.6436

>NTDB_id=394965 GAY96_RS02485 WP_265574174.1 485864..487183(-) (pilR) [Venatoribacter cucullus strain ASxS5]
MTRFRALIIDDEADIRTLVAMTLNRMELECFQAGSVAEARQQLQQRSYHFCITDMKLPDGNGLDLIQLCQQKFPDMPVAM
ITAYGNMELGVSAMKAGAFDVVAKPIDTERLRQLARQALQLSKVPVHLETLPSAIGLIGDSAPMQSLKEQIFKVARTQAP
VFIFGEDGSGKELAARLIHHQSSRAQRPLVSLSCREHSPAELEQALFGEHNPADGLLYAADGGTLLLTDIDQLPPECQGR
LLRVLQDKTLSDPRQEQHLAADFRLLSASDKDLSQLVQQGQFRQDLLFRLNVITLNVPALREHPQDIPLLANHFMRLYCR
QWSMPELTLQADALDALQHYAFPGNVSELENLLQRVVTLAEGDSISAADLQLQTGPQELMPAVQGRIDTSNLEDYLENIE
RRAITQALTATRWNKTAAAEKLGISFRALRYRCKKLGID

Nucleotide

• Length: 1320 bp

>NTDB_id=394965 GAY96_RS02485 WP_265574174.1 485864..487183(-) (pilR) [Venatoribacter cucullus strain ASxS5]
ATGACCCGATTCAGAGCGTTGATTATTGACGATGAAGCCGACATCCGCACCCTGGTGGCCATGACCCTGAACCGCATGGA
GCTGGAATGTTTTCAGGCCGGCTCGGTCGCGGAAGCGCGTCAGCAACTGCAGCAACGCAGTTACCATTTCTGCATTACCG
ATATGAAACTGCCGGATGGTAACGGGCTGGATTTAATTCAGCTGTGTCAGCAGAAATTTCCCGACATGCCGGTGGCCATG
ATTACCGCTTACGGCAATATGGAGCTGGGCGTCAGCGCCATGAAAGCCGGCGCCTTCGATGTGGTGGCCAAACCCATTGA
TACTGAACGGCTGCGCCAGCTGGCCCGCCAGGCACTGCAACTGAGCAAAGTACCGGTGCACCTGGAAACCCTGCCGTCGG
CTATTGGGCTGATTGGTGATTCCGCACCGATGCAAAGCCTGAAAGAACAGATTTTTAAAGTTGCCCGCACCCAGGCGCCG
GTGTTTATTTTCGGTGAAGACGGCAGCGGCAAAGAGCTTGCTGCACGTCTTATTCACCACCAGAGCAGCCGGGCGCAACG
GCCGCTGGTATCACTGTCCTGCCGGGAACATTCACCAGCCGAGCTGGAACAGGCCTTGTTTGGTGAACATAACCCCGCCG
ATGGCCTGCTGTATGCGGCCGATGGCGGTACGCTGTTGTTAACCGACATTGACCAGCTGCCCCCCGAATGCCAGGGCCGT
CTGCTGCGTGTGCTGCAGGATAAAACCCTTAGTGATCCGCGGCAGGAGCAACACCTGGCTGCCGACTTCCGCCTGCTCAG
TGCCAGCGACAAAGACCTGAGCCAGCTGGTACAACAAGGGCAGTTCCGCCAGGACCTGCTGTTCCGGCTGAATGTGATTA
CCCTGAACGTCCCGGCGCTGCGCGAACACCCGCAGGATATCCCGCTGCTGGCCAACCATTTTATGCGCCTGTATTGCCGC
CAGTGGAGTATGCCGGAACTGACCCTGCAGGCCGATGCGCTGGATGCACTGCAACACTATGCTTTTCCCGGCAATGTCAG
CGAGCTGGAAAACCTGCTGCAACGGGTGGTGACACTGGCCGAGGGCGACAGCATCAGCGCCGCTGATCTGCAATTACAAA
CCGGCCCACAAGAGCTGATGCCAGCGGTTCAGGGCCGCATCGACACCAGCAACCTGGAAGATTACCTGGAAAACATTGAA
CGCCGCGCCATCACTCAGGCCTTAACCGCCACCCGCTGGAACAAAACCGCCGCCGCCGAAAAACTGGGCATCAGTTTCCG
CGCCCTGCGTTATCGCTGTAAAAAGCTGGGGATCGACTAA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (7-114)

• Bacterial regulatory protein, Fis family (HTH_8) (396-436)

• Sigma-54 interaction domain (Sigma54_activat) (137-295)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	48.661	100	0.497
pilR	Acinetobacter baumannii strain A118	41.215	100	0.433