Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   GE023_RS03570 Genome accession   NZ_CP053789
Coordinates   719752..720231 (+) Length   159 a.a.
NCBI ID   WP_159306171.1    Uniprot ID   -
Organism   Streptococcus canis strain HL_98_2     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 714752..725231
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GE023_RS03545 (GE023_003545) rfbA 715284..716153 (+) 870 WP_003043910.1 glucose-1-phosphate thymidylyltransferase RfbA -
  GE023_RS03550 (GE023_003550) - 716153..716746 (+) 594 WP_003043909.1 dTDP-4-dehydrorhamnose 3,5-epimerase family protein -
  GE023_RS03555 (GE023_003555) rfbB 716974..718020 (+) 1047 WP_159304939.1 dTDP-glucose 4,6-dehydratase -
  GE023_RS03560 (GE023_003560) - 718397..718588 (-) 192 WP_003043906.1 hypothetical protein -
  GE023_RS03565 (GE023_003565) - 718644..719663 (-) 1020 WP_159304940.1 lactonase family protein -
  GE023_RS03570 (GE023_003570) mutX 719752..720231 (+) 480 WP_159306171.1 8-oxo-dGTP diphosphatase Machinery gene
  GE023_RS03575 (GE023_003575) - 720275..721456 (+) 1182 WP_003043899.1 AI-2E family transporter -
  GE023_RS03580 (GE023_003580) - 721446..722693 (+) 1248 WP_003043897.1 tetratricopeptide repeat protein -
  GE023_RS03585 (GE023_003585) fbp54 722749..724401 (-) 1653 WP_159306172.1 Rqc2 family fibronectin-binding protein Fbp54 -
  GE023_RS11135 - 724628..725041 (+) 414 WP_307761771.1 transposase -

Sequence

Protein


Download         Length: 159 a.a.        Molecular weight: 18762.05 Da        Isoelectric Point: 4.3727

>NTDB_id=394403 GE023_RS03570 WP_159306171.1 719752..720231(+) (mutX) [Streptococcus canis strain HL_98_2]
MTQLATICYIDNGDALLLLHRNKKENDVHEGKWISVGGKLETGETPDECARREILEETHLTVKKMDFKGMITFPEFTPGH
DWYTYVFKVTEFEGELISDEESREGTLEWVPYDQVLEKPTWEGDYDIFKWILEDRPFFSAKFTYDQNNQLIDKSVTFYK

Nucleotide


Download         Length: 480 bp        

>NTDB_id=394403 GE023_RS03570 WP_159306171.1 719752..720231(+) (mutX) [Streptococcus canis strain HL_98_2]
ATGACCCAATTAGCAACCATTTGTTACATAGATAATGGCGATGCTTTGCTGTTGTTGCACCGCAATAAAAAAGAAAATGA
TGTCCACGAAGGCAAGTGGATTTCTGTTGGGGGTAAGCTTGAAACAGGTGAAACCCCAGACGAGTGTGCCCGCCGTGAAA
TTTTAGAAGAAACTCATTTGACGGTTAAAAAAATGGATTTTAAGGGAATGATTACTTTCCCAGAATTTACCCCTGGTCAT
GATTGGTACACCTATGTGTTTAAAGTAACCGAGTTTGAAGGAGAACTAATCTCAGATGAAGAATCCCGGGAAGGGACCTT
GGAATGGGTGCCTTACGATCAGGTATTGGAAAAACCAACCTGGGAAGGGGACTATGACATTTTTAAATGGATTTTAGAAG
ACCGTCCTTTTTTCTCTGCCAAATTTACTTACGACCAAAACAACCAACTCATTGATAAATCCGTGACGTTTTATAAATGA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(2-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

71.069

100

0.711

Multiple sequence alignment