Detailed information    

insolico Bioinformatically predicted

Overview


Name   pilG   Type   Regulator
Locus tag   PAM18_RS02065 Genome accession   NC_017548
Coordinates   443163..443570 (+) Length   135 a.a.
NCBI ID   WP_003084583.1    Uniprot ID   A0A0H2ZL28
Organism   Pseudomonas aeruginosa M18     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 438163..448570
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PAM18_RS02035 (PAM18_0402) - 438211..439215 (-) 1005 WP_003084569.1 aspartate carbamoyltransferase catalytic subunit -
  PAM18_RS02040 (PAM18_0403) pyrR 439239..439751 (-) 513 WP_003084574.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  PAM18_RS02045 (PAM18_0404) ruvX 439863..440297 (-) 435 WP_003121753.1 Holliday junction resolvase RuvX -
  PAM18_RS02050 (PAM18_0405) - 440297..440866 (-) 570 WP_003100947.1 YqgE/AlgH family protein -
  PAM18_RS02055 (PAM18_0406) - 440915..441808 (-) 894 WP_003160914.1 energy transducer TonB -
  PAM18_RS02060 (PAM18_0407) gshB 441955..442908 (-) 954 WP_014602389.1 glutathione synthase -
  PAM18_RS02065 (PAM18_0408) pilG 443163..443570 (+) 408 WP_003084583.1 twitching motility response regulator PilG Regulator
  PAM18_RS02070 (PAM18_0409) pilH 443617..443982 (+) 366 WP_003084587.1 twitching motility response regulator PilH Machinery gene
  PAM18_RS02075 (PAM18_0410) - 444033..444569 (+) 537 WP_003084590.1 chemotaxis protein CheW -
  PAM18_RS02080 (PAM18_0411) pilJ 444654..446702 (+) 2049 WP_003084592.1 chemotaxis chemoreceptor PilJ -
  PAM18_RS02085 (PAM18_0412) pilK 446763..447638 (+) 876 WP_003100938.1 type 4 fimbrial methyltransferase PilK -

Sequence


Protein


Download         Length: 135 a.a.        Molecular weight: 14718.11 Da        Isoelectric Point: 7.1340

>NTDB_id=39156 PAM18_RS02065 WP_003084583.1 443163..443570(+) (pilG) [Pseudomonas aeruginosa M18]
MEQQSDGLKVMVIDDSKTIRRTAETLLKKVGCDVITAIDGFDALAKIADTHPNIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPSFTPVDAVS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=39156 PAM18_RS02065 WP_003084583.1 443163..443570(+) (pilG) [Pseudomonas aeruginosa M18]
ATGGAACAGCAATCCGACGGTTTGAAAGTGATGGTGATCGACGATTCGAAAACGATTCGTCGCACCGCCGAAACACTGCT
GAAAAAGGTCGGTTGCGACGTGATCACGGCAATCGACGGCTTCGATGCCCTGGCGAAGATCGCCGATACCCATCCGAACA
TCATTTTCGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACCTGCGCCCTGATCAAGAACAACAGCGCGTTCAAG
TCCACTCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGCATCGTCGGCTCCGACCAGTA
CCTCACCAAGCCGTTCAGCAAGGAAGAGCTGCTGGGCGCGATCAAGGCACACGTACCCAGCTTCACCCCGGTGGACGCCG
TTTCCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0H2ZL28

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.803

94.074

0.704

  vicR Streptococcus mutans UA159

44.444

86.667

0.385


Multiple sequence alignment