Detailed information    

insolico Bioinformatically predicted

Overview

Name   chpA   Type   Regulator
Locus tag   FSC11_RS03675 Genome accession   NZ_CP044483
Coordinates   760196..764695 (+) Length   1499 a.a.
NCBI ID   WP_163165239.1    Uniprot ID   -
Organism   Acinetobacter schindleri strain HZE30-1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 755196..769695
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FSC11_RS03650 (FSC11_03645) - 755619..756278 (-) 660 WP_071321157.1 hypothetical protein -
  FSC11_RS03655 (FSC11_03650) pilG 756586..756969 (+) 384 WP_004814763.1 twitching motility response regulator PilG Regulator
  FSC11_RS03660 (FSC11_03655) - 757000..757368 (+) 369 WP_004814764.1 response regulator -
  FSC11_RS03665 (FSC11_03660) - 757374..757910 (+) 537 WP_004814765.1 chemotaxis protein CheW -
  FSC11_RS03670 (FSC11_03665) - 757955..760027 (+) 2073 WP_163165237.1 methyl-accepting chemotaxis protein -
  FSC11_RS03675 (FSC11_03670) chpA 760196..764695 (+) 4500 WP_163165239.1 Hpt domain-containing protein Regulator
  FSC11_RS03680 (FSC11_03675) - 764699..765160 (+) 462 WP_163165240.1 hypothetical protein -
  FSC11_RS03685 (FSC11_03680) dapE 765234..766370 (-) 1137 WP_163165242.1 succinyl-diaminopimelate desuccinylase -
  FSC11_RS03690 (FSC11_03685) - 766495..766644 (-) 150 WP_004814773.1 entericidin A/B family lipoprotein -
  FSC11_RS03695 (FSC11_03690) - 766783..767631 (-) 849 WP_163165244.1 DUF1853 family protein -
  FSC11_RS03700 (FSC11_03695) - 767720..768115 (+) 396 WP_004891798.1 YbaN family protein -
  FSC11_RS03705 (FSC11_03700) elsL 768120..768626 (+) 507 WP_163165246.1 cell wall-recycling L,D-carboxypeptidase ElsL -

Sequence

Protein


Download         Length: 1499 a.a.        Molecular weight: 166914.64 Da        Isoelectric Point: 4.2409

>NTDB_id=390249 FSC11_RS03675 WP_163165239.1 760196..764695(+) (chpA) [Acinetobacter schindleri strain HZE30-1]
MKEILKDLVETTALPEDSYLDQDAEILEIFVEEIEEIFVELNTLLPQWFATPDHQETLTTIRRHFHTLKGSGRMVGAKQA
GEIAWAVEDTLNRVLSGSIKLTPVIQKFAQATLNIYQYVLYPCFKQVQPLTVDLRPVVLLGQQLQQQLSPEPALEELLLL
ADNLNAEGQLTGLELADAAEADSSGVEIAETTTAERVEVAEERTDLEETVAIFVEEAEEHLATIHDFLKHENSAKQDYNG
LIRALHTLRGSSSMAQIDDICEASVKVENLFKTLVQDEIASTSKETALLQQYSEFIGDYLHLLKQGNTEKLAGISATFED
AWDAYGFTVTEEQDADQSQGMVTRLVELNIDQLLDAEFEFDKRVLEEYPDYIEALSQQAAELMVHTDNRASIGIHEFASQ
LKAAYDALLARPVLLESDYAFELFAQAHQEFIHLFDTLAAGQRVILNAEVEKLLADLSAFVQQDIEVFATDKVVETAVSA
PVESDISIAVDFTGLSQRIAADRQQQDAEDANRDFDEDLLDIFLEEADELLAGIDEDLNTWSKEPENTHSLNNLMRYLHT
LKGGANMIAATHIGSIAHELESIYERVIRQQITVTPALIQIIRLVQDNVSDRIQSIRDNKIDYPAPEAIHMLQNIQALVT
GTATATPVAAVEKVEAETSVELEIIDDASESAEIVVESQALERVDGFETESVPASDEQIQEDQSGETLTAESAESMLADE
DDLQSIVEETFLEESQEILENAEKLLNQWFDQRSDRSLLLQLQRAAHSIKGGARMISNESIASIAYGLESAFEQFAVHHF
NSNAYDSLLQKTLKWLGQAIFDHDYNGFEQIKAALDAIEFVDVTAQLPERLTKTESLEVTTGFEFVQGDGTEPPNMMGEW
AENTSSDSSNEMIRISAELVEKMIDLSGENAINRSRIEMDLGQLGNTLNEMELAIKRLADQLRRMEGELESQIIAKHGSE
NSRYADFDPLEMDQYSSLNQLSKSLAESASDLVDFKTTLAEKIRDTEGLLLQQSRIQAEIQESLMRTRLVPFDRMLPRLQ
RIVRQTSTTLNRPAELIVQNTEGELDRTILERLVNPFEHMLRNAIDHGLEDTAERLALNKPEVGSIVLNISRQGTDVIIS
FSDDGKGIDAESIRAKAISLDLIKAEQQVDQEELLQFIFHPGFSTAKAVTQISGRGVGLDVVQSEIKTLGGHVSVNSELG
KGTTFTIRVPTTVAVSDALMVKAGDQQFAISLAQIDRIVRIAPATLETYFNSKDDYFKIDGVNYKLRYLSEFVSNQPIPR
LNNVAHSLPVLLIKGNGGQSIALLVDQLVGSRAQIVVKPIGQQFASVGVIAGATILGDGQVCLILDGQNIARQVQATQRI
KQLSDQQDLSRRGNARRLVMIVDDSVTVRKVTSRLLERQGYDIVTAKDGVDAIEQLENVRPDLMLLDIEMPRMDGFEVTN
LVRHHDIHRNLPIIMITSRTGEKHRERAFSLGVTHYMGKPFQEAELLANVQELIAAQQG

Nucleotide


Download         Length: 4500 bp        

>NTDB_id=390249 FSC11_RS03675 WP_163165239.1 760196..764695(+) (chpA) [Acinetobacter schindleri strain HZE30-1]
ATGAAAGAAATATTAAAAGATCTAGTTGAAACAACAGCGCTTCCTGAAGATAGTTATCTTGATCAAGATGCTGAAATTTT
AGAGATATTTGTCGAAGAGATTGAAGAAATCTTTGTCGAGTTAAATACTTTATTGCCACAGTGGTTTGCCACACCAGATC
ATCAAGAAACATTAACCACCATTCGCCGCCATTTCCATACGCTGAAAGGTTCGGGTCGTATGGTCGGTGCGAAGCAGGCG
GGTGAAATTGCCTGGGCAGTTGAAGATACTTTGAACCGCGTACTTTCCGGTTCAATCAAATTAACGCCAGTCATTCAGAA
GTTCGCGCAAGCAACTTTAAATATCTATCAATATGTATTGTATCCATGCTTTAAGCAGGTACAGCCATTAACCGTGGATT
TACGTCCAGTCGTACTTTTAGGACAACAATTACAACAGCAATTGAGTCCAGAACCGGCACTTGAAGAATTATTGCTACTT
GCGGACAATCTGAATGCTGAAGGTCAGCTAACAGGTCTTGAACTTGCGGATGCTGCAGAAGCAGATTCATCAGGAGTAGA
GATTGCTGAAACTACTACCGCAGAACGAGTAGAAGTTGCTGAAGAACGTACTGACCTTGAAGAAACGGTGGCGATCTTTG
TTGAAGAAGCCGAGGAACATCTTGCGACAATCCATGATTTCCTAAAACATGAAAATAGTGCCAAGCAAGACTATAATGGC
CTGATTCGTGCATTGCATACCCTGCGTGGCAGCTCTTCTATGGCACAAATTGATGATATCTGTGAGGCCAGCGTTAAAGT
AGAGAATTTATTTAAAACGCTGGTTCAGGATGAAATTGCTTCAACTTCCAAAGAAACAGCACTATTACAACAATATTCAG
AATTTATCGGTGATTATTTACATCTATTGAAACAAGGTAACACTGAAAAGCTGGCAGGGATTTCTGCTACTTTTGAGGAT
GCCTGGGATGCCTATGGCTTTACTGTGACTGAAGAGCAGGATGCTGATCAATCTCAAGGTATGGTTACACGTCTGGTTGA
ACTGAATATTGATCAGTTACTGGATGCCGAATTTGAGTTTGATAAGCGGGTACTTGAAGAATATCCAGATTATATTGAAG
CTTTAAGCCAGCAAGCCGCAGAGCTGATGGTACATACGGATAATCGTGCATCGATCGGTATTCATGAATTCGCATCCCAA
TTAAAAGCAGCTTATGATGCTTTGCTGGCGAGACCGGTCTTGCTTGAAAGTGATTATGCCTTCGAACTGTTTGCACAGGC
ACACCAGGAATTTATTCACCTGTTCGATACGCTCGCTGCAGGACAGCGGGTGATTTTGAATGCCGAAGTTGAAAAACTTC
TGGCGGATCTGTCTGCCTTTGTACAGCAAGACATCGAAGTATTCGCTACAGACAAAGTTGTTGAAACTGCGGTATCTGCG
CCAGTAGAGTCGGATATATCCATAGCAGTTGATTTTACTGGGCTCAGCCAGCGTATTGCAGCTGATCGTCAGCAGCAGGA
CGCTGAAGATGCCAACCGTGATTTCGATGAAGACTTGCTGGATATCTTCCTGGAAGAAGCAGATGAGTTGCTGGCAGGCA
TTGATGAAGACCTGAATACCTGGTCCAAAGAACCTGAAAATACCCACTCATTGAACAATCTGATGCGTTATTTGCATACC
CTGAAGGGGGGTGCAAACATGATTGCTGCCACGCATATCGGTTCGATTGCACATGAGCTGGAAAGTATTTATGAGCGCGT
GATCCGTCAGCAGATTACCGTAACACCTGCATTGATCCAGATTATCCGACTGGTACAGGATAACGTGTCAGACCGTATCC
AGAGTATTCGTGATAATAAGATTGATTATCCGGCACCTGAAGCTATTCATATGCTGCAAAATATCCAGGCACTTGTGACT
GGAACAGCTACTGCAACTCCGGTAGCTGCTGTTGAGAAGGTAGAAGCAGAGACTTCTGTAGAACTAGAAATTATTGACGA
TGCATCGGAATCTGCTGAGATCGTTGTGGAATCACAAGCGCTTGAGCGAGTAGACGGCTTTGAAACTGAATCTGTTCCTG
CATCAGATGAGCAAATTCAGGAAGATCAGTCAGGCGAAACACTTACTGCTGAGTCAGCTGAATCTATGCTTGCTGATGAA
GATGATCTACAATCGATTGTTGAAGAAACCTTCCTGGAAGAATCGCAAGAGATTCTGGAAAATGCAGAAAAATTACTGAA
CCAATGGTTCGATCAGCGAAGTGACCGTAGCTTATTGCTGCAACTTCAGCGTGCTGCCCACAGTATCAAGGGTGGCGCCC
GCATGATCAGCAATGAAAGCATCGCAAGTATTGCTTATGGTCTGGAAAGTGCATTTGAACAGTTTGCTGTTCATCATTTT
AACTCCAATGCCTATGACAGTCTGCTGCAAAAGACCCTGAAATGGCTGGGTCAAGCCATTTTTGATCATGATTACAATGG
TTTTGAGCAAATCAAAGCAGCGCTGGATGCGATTGAGTTTGTAGATGTCACTGCACAGCTACCTGAACGTCTGACCAAAA
CTGAAAGTCTGGAAGTTACAACTGGCTTCGAGTTTGTTCAGGGTGATGGTACTGAACCACCAAATATGATGGGTGAGTGG
GCTGAGAACACCTCAAGCGATAGTAGTAACGAGATGATCCGTATTTCAGCCGAACTGGTCGAGAAGATGATTGACCTGTC
AGGCGAAAATGCAATTAACCGTTCGCGTATCGAGATGGATCTGGGACAGCTCGGCAATACCTTAAATGAGATGGAACTGG
CGATCAAACGTCTGGCTGATCAGCTGCGCCGTATGGAAGGCGAGCTGGAGTCTCAGATTATTGCCAAACATGGCTCAGAA
AACTCACGCTATGCTGACTTCGACCCCTTGGAGATGGACCAATATTCATCCCTGAACCAGTTATCTAAATCTCTTGCTGA
ATCTGCATCGGACTTGGTCGACTTTAAGACCACGCTCGCGGAAAAAATCCGTGATACCGAAGGTTTGCTATTGCAACAAT
CGCGTATCCAGGCTGAGATTCAGGAAAGTCTGATGCGTACCCGTCTGGTACCATTTGACCGTATGTTGCCACGTTTACAA
CGTATTGTGCGTCAAACTTCGACCACACTGAACCGTCCGGCAGAGCTGATTGTTCAGAATACCGAAGGTGAACTCGACCG
TACCATTCTGGAACGTCTGGTAAACCCATTTGAGCACATGCTACGTAACGCGATTGACCATGGTCTGGAAGATACTGCAG
AACGGCTTGCGCTGAATAAGCCAGAAGTCGGTTCAATTGTCCTGAACATTAGCCGTCAGGGTACCGATGTCATTATCTCC
TTTAGTGATGATGGTAAGGGGATTGATGCGGAGAGTATTCGTGCTAAAGCCATCAGTCTGGACTTGATCAAAGCGGAACA
GCAGGTGGATCAGGAAGAATTGCTGCAATTCATCTTCCATCCAGGTTTCAGTACGGCTAAAGCAGTCACCCAGATTTCGG
GTCGAGGTGTTGGTCTGGACGTGGTACAAAGCGAAATCAAAACGCTGGGCGGTCACGTTTCGGTAAATTCTGAACTGGGC
AAAGGCACGACCTTTACGATTCGCGTACCGACCACTGTGGCCGTCAGTGATGCCTTAATGGTGAAAGCGGGTGACCAGCA
ATTTGCCATTTCTCTGGCACAGATTGACCGTATTGTCCGTATTGCACCAGCAACACTGGAAACTTACTTCAACAGTAAGG
ATGATTACTTCAAGATTGATGGTGTGAACTACAAGCTGCGCTATCTGTCTGAGTTTGTCTCTAATCAGCCAATTCCACGT
TTGAACAATGTCGCGCATTCATTACCAGTACTCCTTATCAAGGGTAATGGTGGTCAAAGTATCGCTTTGCTGGTGGATCA
ATTAGTTGGCTCACGTGCACAGATCGTAGTGAAACCGATTGGACAGCAGTTTGCCAGTGTAGGTGTGATTGCAGGGGCAA
CCATTCTTGGTGATGGTCAGGTCTGTCTGATTCTGGATGGTCAGAATATTGCCCGTCAGGTTCAGGCGACTCAGCGTATC
AAACAGTTATCTGATCAGCAGGATCTGTCGCGTCGTGGTAATGCACGTCGTCTGGTCATGATTGTCGATGACTCGGTAAC
TGTACGTAAGGTAACGTCACGTCTGTTAGAGCGTCAGGGTTATGATATTGTCACTGCCAAAGATGGTGTCGACGCGATTG
AACAGTTGGAAAATGTCCGTCCAGACCTGATGTTGCTGGATATTGAAATGCCACGTATGGATGGTTTCGAAGTAACTAAC
CTGGTTCGCCATCATGATATTCACCGCAACTTGCCAATTATCATGATCACCTCACGTACTGGGGAGAAGCATCGTGAGCG
TGCCTTCAGTCTGGGTGTAACACACTATATGGGTAAACCGTTCCAGGAAGCGGAGCTGCTTGCCAATGTTCAAGAATTAA
TTGCTGCTCAACAGGGGTAA

Domains

Predicted by InterproScan.

CheW-like domain (CheW)

(1218-1354)

Hpt domain (Hpt)

(25-103)

Hpt domain (Hpt)

(209-283)

Hpt domain (Hpt)

(729-793)

Hpt domain (Hpt)

(518-604)

Response regulator receiver domain (Response_reg)

(1379-1490)

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(1076-1211)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

60.654

100

0.619

Multiple sequence alignment