Detailed information    

insolico Bioinformatically predicted

Overview

Name   chpA   Type   Regulator
Locus tag   FSC05_RS03895 Genome accession   NZ_CP044450
Coordinates   804032..808528 (+) Length   1498 a.a.
NCBI ID   WP_163141441.1    Uniprot ID   -
Organism   Acinetobacter indicus strain MMS9-2     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 799032..813528
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FSC05_RS03870 (FSC05_03890) - 799762..800382 (+) 621 Protein_752 IS982-like element ISAcsp2 family transposase -
  FSC05_RS03875 (FSC05_03895) pilG 800449..800832 (+) 384 WP_005179541.1 twitching motility response regulator PilG Regulator
  FSC05_RS03880 (FSC05_03900) - 800849..801217 (+) 369 WP_005179539.1 PleD family two-component system response regulator -
  FSC05_RS03885 (FSC05_03905) - 801221..801757 (+) 537 WP_005179538.1 chemotaxis protein CheW -
  FSC05_RS03890 (FSC05_03910) - 801803..803875 (+) 2073 WP_163141438.1 methyl-accepting chemotaxis protein -
  FSC05_RS03895 (FSC05_03915) chpA 804032..808528 (+) 4497 WP_163141441.1 Hpt domain-containing protein Regulator
  FSC05_RS03900 (FSC05_03920) - 808525..808986 (+) 462 WP_005179535.1 hypothetical protein -
  FSC05_RS03905 (FSC05_03925) dapE 809056..810189 (-) 1134 WP_005179534.1 succinyl-diaminopimelate desuccinylase -
  FSC05_RS03910 (FSC05_03930) - 810316..810462 (-) 147 WP_005179532.1 entericidin A/B family lipoprotein -
  FSC05_RS03915 (FSC05_03935) - 810563..811465 (-) 903 WP_016659332.1 DUF1853 family protein -
  FSC05_RS03920 (FSC05_03940) - 811556..811945 (+) 390 WP_075167111.1 YbaN family protein -
  FSC05_RS03925 (FSC05_03945) elsL 811942..812472 (+) 531 WP_005179524.1 cell wall-recycling L,D-carboxypeptidase ElsL -

Sequence

Protein


Download         Length: 1498 a.a.        Molecular weight: 166869.21 Da        Isoelectric Point: 4.2803

>NTDB_id=390079 FSC05_RS03895 WP_163141441.1 804032..808528(+) (chpA) [Acinetobacter indicus strain MMS9-2]
MKEILKNLVETTALPEDSYLDQDAEILEIFVEEIEEIFVELKDLLAQWATQPNDQETLTTIRRHFHTLKGSGRMVGAKSA
GELAWTVEDTLNRVISGSLTLSAQVQQFATAVANVFEYKLYPSFKHAQPMALDLRPLVLLGQQLQQNLSPEPALEELLQL
ASSLRSSDSITGLEFDTASTDEQVAADTELAVADSVEEDPLAAETLAIFIEEAEEHLLTVDRFLAHDELKTQDYNGLIRA
LHTLRGSSSMAHIEQIFDASSKVENLFKTLLQDEIESTSKETALLLQYAEFVRDYLHLLPQNDSAGMDRIYQTFNTAWQN
YGFSLEDVDESVNPQGLVSKLIELNIDQLLDAEFEFDQRAQAEYPEYIQTLSHQAKLLVERTDNRASQGIHDFTQELQLA
YAALLDKPSLLHSDYAFELFGQAHQEFIHLFDTLAAGQRVSLSEDAQEIINNLSAFVQQDIEALSLETDTTEAVTETAEI
GAGLNLAVLSQRLEADRQYMDSAEANKDFDPDLLDIFLEEAEELLTGIDQDVNSWSQDSSNTAALNNLMRHLHTLKGGAN
MIAASHIGLIAHHLETIYERIINRQMSASTALIQIIRLVQDNIADRIQTIREQQVDYPAQESLAILENISELAQGQLVEA
ESLAVAAEATSSADAQQSDAAALEFELEQPAPAETAYAAPEDEQQPDISSEPVLEDAPTLAEQSTPTDAVSTTENDGEDN
LHSIVEETFLEEAEELLDTTESLLKQWFDHRSDRSILLQLQRAAHSLKGGARMAEIEPVAVIAYQLENTFEQFAVHQFNS
NAYDALLNTTVAWLKEAIFQRDYSNFDSLKASLESIEYVNATAQLPERFNTADLLAPSKTFEFVQGDGAEPPSMQGEWSE
TAQLDNSNEMIRISADLVEKMIDLSGENAINRSRIEMELGQLGGTLNEMELAIKRLADQLRRMEGELESQIIAKHGDEHS
RYTDFDPLEMDQYSSLNQLSKSLAESASDLVDFKTTLADKIRDAEGLLLQQSRIQAEIQESLMRTRLVPFSRMLPRLQRI
VRQTSSTLNRPAELVVHNTEGELDRTILERLISPFEHMLRNAVDHGLEDAAVRKQAAKPEVGQIELNIGRQGTDVLISFT
DDGKGIDETKIHAKALSLGLIQPEQQLDKKEILQLIFHPGFSTAQAVTQISGRGVGLDVVQSEIKALGGHVEVDSELGKG
TTFSIRVPTTVAVSDALMVKVGDQQFAIPLAQIDRIVRISPSALESYFSSKDDYFKIDQQNYKLRYLSEFVANQPLPRLS
NIAHSLPVLLIKGNTGQTIALLVDQLIGSRGQIVMKPIGQQFSSVGSIAGATILGDGQVCLILDGQNIARQIQATQRIKH
VMEPREVQRRDTCRLVIIVDDSVTVRKVTSRLLERQGFDVVTAKDGVDAIEQLENVKPDLMLLDIEMPRMDGFEVTNLVR
HHDIHRDLPIIMITSRTGEKHRERAFSLGVTHYMGKPFQEAELLANIENILHSSEAKA

Nucleotide


Download         Length: 4497 bp        

>NTDB_id=390079 FSC05_RS03895 WP_163141441.1 804032..808528(+) (chpA) [Acinetobacter indicus strain MMS9-2]
ATGAAAGAAATATTAAAAAATTTAGTTGAAACGACTGCGCTTCCTGAAGATAGTTATCTTGATCAAGATGCAGAAATTCT
AGAAATTTTTGTTGAAGAAATTGAAGAAATCTTCGTTGAGCTAAAAGACCTGTTGGCTCAATGGGCCACGCAGCCTAACG
ATCAGGAAACGCTAACCACCATTCGCCGTCATTTTCATACCTTAAAAGGTTCGGGACGTATGGTTGGGGCCAAGTCGGCA
GGGGAGCTGGCCTGGACGGTTGAAGATACCTTAAACCGGGTCATTTCCGGTAGCCTGACCCTGTCAGCGCAGGTGCAGCA
GTTTGCAACCGCGGTGGCGAACGTCTTTGAATACAAACTTTATCCAAGCTTTAAACATGCCCAGCCGATGGCACTGGACC
TGCGTCCATTGGTGCTATTAGGACAACAATTACAACAAAATTTAAGTCCTGAACCGGCTTTAGAAGAGCTGTTACAACTG
GCAAGCAGCCTAAGGTCCAGCGACAGTATCACCGGTCTGGAGTTTGATACAGCAAGTACTGATGAGCAGGTTGCTGCAGA
CACCGAGCTGGCTGTGGCTGATAGTGTTGAAGAAGATCCGCTAGCAGCTGAAACACTGGCCATCTTTATTGAAGAAGCGG
AAGAACACCTGTTAACGGTGGATCGCTTCCTGGCACACGATGAGCTGAAAACCCAAGATTACAATGGCCTGATTCGTGCC
CTGCATACCTTGCGCGGCAGTTCATCCATGGCACACATCGAGCAGATTTTTGATGCCAGCTCCAAGGTCGAAAACCTGTT
CAAGACCCTGTTACAGGATGAAATTGAATCGACCTCCAAAGAAACCGCACTGTTATTGCAATATGCTGAATTTGTGCGGG
ATTATCTGCATCTGTTGCCGCAGAATGACAGTGCCGGCATGGACCGGATTTATCAGACTTTCAATACTGCATGGCAGAAC
TATGGCTTTAGCCTGGAAGATGTTGATGAATCAGTGAATCCGCAAGGTCTGGTATCCAAGCTGATTGAACTGAATATTGA
TCAGTTGCTCGATGCTGAGTTCGAATTTGACCAGCGCGCGCAGGCTGAATATCCGGAATATATCCAGACCCTGAGCCATC
AGGCGAAGCTGCTGGTAGAGCGTACCGATAACCGCGCCTCTCAGGGTATTCATGATTTTACCCAGGAATTACAACTGGCC
TATGCGGCCTTGCTGGATAAGCCAAGCTTGCTGCATAGCGATTATGCCTTTGAATTATTTGGACAGGCGCATCAGGAATT
TATCCATCTGTTTGATACCCTGGCTGCCGGGCAACGTGTCAGCTTAAGCGAAGATGCTCAGGAGATCATCAATAACCTGA
GTGCCTTTGTACAGCAGGATATTGAAGCACTAAGCCTAGAAACTGATACCACAGAAGCTGTAACCGAAACGGCTGAAATC
GGTGCCGGGCTGAATCTGGCCGTATTGTCACAGCGTCTGGAAGCTGACCGTCAATACATGGACAGCGCTGAAGCCAATAA
GGACTTTGATCCAGACCTGCTGGACATTTTCCTGGAAGAAGCCGAAGAGTTACTTACGGGTATTGACCAGGATGTTAACA
GCTGGAGCCAAGACTCGAGCAATACTGCTGCACTGAACAATCTGATGCGCCATCTGCACACCTTAAAAGGTGGTGCCAAC
ATGATTGCAGCCAGCCATATCGGTCTGATTGCGCACCATTTAGAAACTATTTATGAGCGCATTATTAACCGTCAGATGAG
CGCATCGACCGCATTGATTCAGATTATCCGTCTGGTTCAGGACAATATTGCGGACCGTATCCAGACCATCCGTGAACAGC
AAGTCGATTATCCGGCGCAAGAATCACTGGCGATTCTGGAAAATATTAGCGAACTGGCCCAGGGTCAACTGGTTGAAGCT
GAATCGCTGGCAGTGGCGGCTGAAGCGACCTCTAGCGCAGATGCACAACAATCTGATGCAGCTGCACTTGAGTTTGAACT
GGAACAGCCAGCACCTGCAGAAACAGCCTATGCTGCGCCTGAAGATGAGCAGCAGCCAGATATTAGCAGCGAACCGGTAC
TGGAAGATGCACCGACTCTGGCTGAGCAGAGCACCCCGACAGACGCGGTATCTACTACTGAAAATGACGGTGAAGACAAT
CTGCATTCGATTGTGGAAGAAACCTTCCTGGAAGAAGCTGAAGAGCTGCTCGACACCACAGAAAGCCTGTTAAAGCAGTG
GTTTGACCATCGTAGTGACCGAAGCATTTTGCTGCAGTTACAACGTGCTGCGCACAGCCTGAAAGGCGGCGCGCGTATGG
CCGAAATCGAGCCGGTGGCCGTGATTGCCTATCAGCTGGAAAATACCTTTGAACAGTTCGCGGTGCATCAGTTTAATTCC
AATGCCTATGATGCCTTGCTCAACACCACTGTGGCTTGGTTAAAAGAAGCCATCTTCCAGCGCGATTACAGCAATTTTGA
TAGCCTGAAAGCCAGCCTGGAGTCGATTGAATACGTCAATGCGACGGCGCAGCTGCCAGAACGCTTCAATACCGCCGATC
TGCTGGCGCCAAGCAAAACCTTCGAATTTGTGCAGGGTGATGGTGCCGAGCCGCCATCCATGCAGGGCGAATGGAGCGAA
ACCGCACAGCTGGATAACAGCAATGAGATGATCCGTATTTCGGCTGATCTGGTTGAGAAGATGATTGACCTGTCGGGTGA
AAACGCGATTAACCGCTCGCGAATCGAGATGGAGCTGGGTCAGCTGGGCGGTACCCTGAATGAAATGGAACTGGCGATTA
AACGTCTGGCCGATCAGTTACGCCGAATGGAAGGCGAGCTGGAAAGCCAGATTATTGCCAAACATGGTGATGAACATTCA
CGCTATACCGACTTTGACCCGCTGGAGATGGACCAGTATTCATCCTTGAACCAGCTGTCGAAATCGTTGGCGGAATCGGC
ATCGGACTTGGTGGACTTTAAGACCACGCTGGCGGACAAGATTCGTGATGCCGAAGGTCTGTTACTGCAACAGTCGCGGA
TTCAGGCAGAAATTCAGGAAAGCCTGATGCGCACCCGCCTGGTACCGTTCTCGCGTATGTTGCCACGTTTACAGCGGATT
GTGCGTCAGACCTCATCGACCTTAAACCGTCCTGCCGAGCTGGTGGTACACAATACCGAAGGCGAGCTGGACCGGACCAT
TTTGGAACGCCTGATTTCACCGTTTGAACACATGCTGCGTAATGCGGTGGACCATGGTCTGGAAGATGCCGCTGTACGTA
AACAGGCAGCGAAGCCGGAAGTGGGCCAGATTGAGCTGAACATTGGCCGTCAGGGCACTGATGTACTGATTAGCTTTACC
GATGATGGTAAGGGGATTGATGAAACCAAAATTCACGCCAAAGCCCTGAGCCTTGGCCTGATTCAGCCAGAGCAACAGCT
GGACAAGAAAGAAATTCTGCAGCTGATTTTCCATCCGGGCTTTAGTACCGCACAGGCCGTGACCCAGATTTCGGGTCGTG
GCGTCGGTCTGGACGTGGTGCAAAGCGAAATTAAAGCGCTGGGCGGCCATGTCGAGGTCGATTCTGAACTCGGTAAAGGC
ACTACTTTCAGTATTCGCGTACCGACCACAGTGGCGGTATCCGATGCCTTGATGGTAAAAGTTGGCGATCAGCAGTTCGC
AATTCCATTGGCGCAAATTGACCGTATTGTACGAATTTCACCTTCTGCGCTGGAAAGTTACTTCAGCAGCAAAGATGACT
ACTTCAAGATTGATCAGCAAAACTATAAGTTGCGCTATCTGTCCGAGTTTGTTGCCAATCAGCCATTGCCGCGTTTAAGC
AATATCGCGCATTCATTGCCGGTGCTGCTGATTAAAGGCAATACTGGTCAGACCATTGCCTTACTGGTCGATCAGCTGAT
TGGTTCACGTGGCCAGATTGTGATGAAACCGATTGGCCAGCAGTTCTCCAGCGTGGGTTCGATTGCCGGCGCGACCATTC
TCGGTGATGGTCAGGTCTGTCTGATTCTGGATGGTCAGAATATTGCCCGTCAGATTCAGGCAACCCAGCGCATCAAGCAT
GTGATGGAGCCGCGTGAAGTACAGCGTCGTGATACCTGTCGTCTGGTGATAATTGTGGATGACTCGGTGACCGTACGTAA
GGTCACGTCACGTCTGCTCGAACGTCAGGGCTTTGATGTGGTCACGGCCAAAGACGGTGTCGATGCGATTGAGCAGCTGG
AAAATGTTAAACCGGATCTGATGCTGCTGGATATTGAAATGCCGCGTATGGATGGCTTTGAGGTGACCAACCTGGTACGC
CACCATGACATCCATCGTGACTTGCCAATTATCATGATTACCTCGCGTACCGGTGAAAAACACCGCGAACGTGCCTTTAG
CTTGGGGGTAACGCACTATATGGGTAAACCGTTCCAGGAAGCAGAATTGCTTGCCAATATTGAAAACATTTTGCATAGCA
GTGAGGCTAAAGCATGA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(1074-1209)

Response regulator receiver domain (Response_reg)

(1376-1487)

Hpt domain (Hpt)

(727-791)

Hpt domain (Hpt)

(25-110)

Hpt domain (Hpt)

(204-284)

Hpt domain (Hpt)

(512-598)

CheW-like domain (CheW)

(1216-1351)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

61.089

100

0.621

Multiple sequence alignment