Detailed information NTG0387562

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: FOB45_RS18420
• Genome accession: NZ_CP044086
• Coordinates: 2379748..2381979 (-)
• Length: 743 a.a.
• NCBI ID: WP_150347733.1
• Uniprot ID: -
• Organism: Pseudomonas luteola strain FDAARGOS_637
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2374748..2386979

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FOB45_RS18385 (FOB45_18385)	murB	2375168..2376193 (-)	1026	WP_010797722.1	UDP-N-acetylmuramate dehydrogenase	-
FOB45_RS18390 (FOB45_18390)	-	2376174..2376653 (-)	480	WP_010797721.1	low molecular weight protein-tyrosine-phosphatase	-
FOB45_RS18395 (FOB45_18395)	kdsB	2376653..2377420 (-)	768	WP_150347732.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
FOB45_RS18400 (FOB45_18400)	-	2377417..2377602 (-)	186	WP_010797719.1	Trm112 family protein	-
FOB45_RS18405 (FOB45_18405)	lpxK	2377628..2378626 (-)	999	WP_010797718.1	tetraacyldisaccharide 4'-kinase	-
FOB45_RS18410 (FOB45_18410)	-	2378623..2379063 (-)	441	WP_010797717.1	biopolymer transporter ExbD	-
FOB45_RS18415 (FOB45_18415)	exbB	2379060..2379698 (-)	639	WP_019365918.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
FOB45_RS18420 (FOB45_18420)	comA	2379748..2381979 (-)	2232	WP_150347733.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
FOB45_RS18425 (FOB45_18425)	lolD	2382036..2382719 (-)	684	WP_010797714.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
FOB45_RS18430 (FOB45_18430)	-	2382712..2383956 (-)	1245	WP_074827482.1	lipoprotein-releasing ABC transporter permease subunit	-
FOB45_RS18435 (FOB45_18435)	lolD	2383991..2384674 (-)	684	WP_019365915.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
FOB45_RS18440 (FOB45_18440)	-	2384667..2385923 (-)	1257	WP_037030120.1	lipoprotein-releasing ABC transporter permease subunit	-
FOB45_RS18445 (FOB45_18445)	-	2386165..2386740 (+)	576	WP_010797710.1	PilZ domain-containing protein	-

Sequence

Protein

• Length: 743 a.a.
• Molecular weight: 80784.57 Da
• Isoelectric Point: 9.4979

>NTDB_id=387562 FOB45_RS18420 WP_150347733.1 2379748..2381979(-) (comA) [Pseudomonas luteola strain FDAARGOS_637]
MRTGIVAFIAGLLVLRFLPELPDREVLVACLIVAFGLMFLPRVYVAGAFLIGFGWACLSAHWALDERLDDGLDGRIVWLE
GTVVGLPELREGSTRFLLENAQSRRGALPSRIRVSWSNAPAVRSGEQWRLAVELQKPGGLHNLRGMDGEAWMLAHRIGAS
GVVKAGQRLSRQATLDAWRDALRQRLLHLDAFQRNGGLAALVLGDGSGVSTQDWQLLQATGTTHLMVISGQHITLLSGFV
FALIAGLARLGYWPVRMPWFPVACLSALVSAVGYGFLAGFDVPVRRACVMIALITLWRLRFRHLGAWIPVGIALAAVLVA
EPLASLTAGFWLSFIAVGLLIWIFGGRLGQWNPWRSWGRAQWMMAVGLAPVLLALDLPVSLSGPIANLVAVPWVDFLVVP
AALLGTVFLLILPPLGELLLWCSGATLDGLFAFLGYVSALVPAWQGAWMPAWAVALGMLGVLLWLAPDGVPVRPLAVFLL
IPLFWPPVTRPASGLAKVTVLDVGQGLSVFIQTKGHAMLYDAGPLSGSYDAGERVVVPNLKATGVSHLDMMLVSHGDADH
AGGAAAVFSALKVDKVVSGEVRRLPSGLHPTPCEDNQRWVWEGVLFTVWQPSPLMKGNAASCVLMVEAAGERLLLTGDID
EKAERRLVESGRDIRAQWLLAPHHGSRTASSERFVSLVKPEYALISRGIHNNFGHPHAQVISRYERHGVRIYDTALNGAI
SFTLGKHDLPQGARQKRYFWQEK

Nucleotide

• Length: 2232 bp

>NTDB_id=387562 FOB45_RS18420 WP_150347733.1 2379748..2381979(-) (comA) [Pseudomonas luteola strain FDAARGOS_637]
ATGCGCACAGGGATCGTTGCGTTCATTGCAGGCCTATTGGTGCTGCGCTTTCTACCCGAATTGCCTGATCGAGAGGTTCT
TGTTGCCTGCTTGATAGTGGCATTCGGTCTGATGTTCCTGCCCCGTGTCTACGTGGCAGGTGCCTTCTTGATAGGCTTTG
GCTGGGCCTGCCTGTCGGCTCATTGGGCGCTGGATGAGCGACTGGATGATGGTCTGGACGGACGAATAGTCTGGCTTGAG
GGAACAGTTGTAGGGCTTCCTGAGTTGCGCGAAGGTTCGACGCGTTTTCTTTTGGAAAATGCGCAGAGCCGTCGAGGGGC
TTTACCAAGCCGTATCCGAGTCTCCTGGTCAAATGCGCCAGCCGTACGATCAGGTGAGCAATGGCGTCTCGCTGTAGAGT
TGCAAAAGCCGGGCGGGCTCCACAATCTCCGAGGAATGGATGGCGAAGCCTGGATGCTGGCTCATCGAATCGGTGCAAGC
GGTGTCGTTAAGGCAGGGCAACGACTTTCCCGTCAGGCCACCTTGGATGCCTGGCGAGACGCATTAAGGCAGCGGTTATT
GCATCTTGACGCCTTTCAGCGAAACGGTGGACTGGCTGCATTGGTTCTGGGCGACGGCTCAGGCGTTTCGACTCAGGATT
GGCAGCTTTTACAGGCCACAGGCACCACGCATCTGATGGTTATTTCCGGTCAGCACATTACGCTGCTTTCGGGATTTGTA
TTTGCGCTGATCGCCGGATTGGCGCGTCTGGGCTACTGGCCTGTCCGGATGCCGTGGTTTCCTGTTGCTTGCCTGTCTGC
GCTTGTATCGGCGGTAGGATACGGATTTCTGGCAGGCTTTGACGTTCCTGTAAGACGAGCCTGCGTCATGATCGCGCTGA
TTACACTATGGCGATTACGGTTTCGTCACCTGGGGGCATGGATACCGGTAGGTATTGCCTTGGCGGCTGTGCTGGTGGCT
GAGCCGCTGGCAAGCCTTACGGCAGGCTTTTGGTTGTCTTTTATCGCTGTAGGTCTCTTGATATGGATCTTTGGCGGCCG
TTTGGGTCAATGGAATCCTTGGCGCAGTTGGGGGCGGGCCCAATGGATGATGGCAGTCGGGCTAGCGCCGGTTTTACTGG
CTCTGGATCTGCCTGTCAGTCTGTCGGGGCCGATCGCTAACCTTGTTGCCGTGCCTTGGGTAGACTTTTTAGTGGTGCCA
GCCGCCTTGCTGGGTACCGTGTTTCTTCTGATCCTTCCTCCCCTAGGCGAGTTGCTACTGTGGTGTTCAGGCGCGACCCT
TGATGGTTTATTCGCATTTCTCGGGTACGTGTCGGCACTGGTTCCTGCGTGGCAGGGAGCATGGATGCCTGCGTGGGCTG
TCGCTTTAGGCATGCTGGGTGTGTTGCTATGGCTGGCTCCCGATGGGGTGCCGGTCAGGCCTTTGGCAGTATTTCTGCTG
ATTCCGTTGTTCTGGCCGCCAGTGACCCGACCAGCGTCAGGACTGGCAAAGGTAACCGTGCTCGACGTCGGACAGGGGTT
GTCTGTATTCATACAGACCAAAGGCCACGCCATGCTATACGACGCCGGGCCGCTTAGCGGAAGCTATGATGCTGGCGAAA
GGGTGGTAGTCCCCAACCTGAAAGCTACAGGCGTCAGTCATCTAGACATGATGTTGGTCAGTCATGGGGACGCAGATCAT
GCAGGAGGCGCCGCTGCTGTTTTCAGTGCCTTGAAGGTGGACAAGGTGGTGAGCGGGGAAGTGAGGCGGCTTCCTTCTGG
CTTGCATCCGACACCCTGCGAAGATAATCAGCGCTGGGTGTGGGAGGGAGTCTTATTTACTGTCTGGCAGCCTAGCCCCT
TGATGAAGGGAAACGCTGCATCGTGCGTGCTGATGGTAGAAGCAGCAGGCGAGCGCCTTTTGCTAACCGGTGATATAGAC
GAAAAGGCCGAGCGTCGCCTCGTTGAATCTGGGCGGGATATAAGGGCTCAATGGTTATTGGCACCTCATCATGGCAGTCG
AACGGCTTCGAGCGAGCGTTTCGTCAGTCTGGTAAAACCTGAATATGCCTTGATCTCGAGGGGAATTCACAACAACTTTG
GCCATCCACATGCACAAGTGATCAGTCGTTATGAACGTCATGGCGTCCGGATTTACGATACAGCCTTGAACGGTGCAATA
TCATTTACCCTCGGTAAGCATGATTTGCCGCAAGGCGCTCGTCAGAAGCGTTATTTCTGGCAAGAAAAATAA

Domains

Predicted by InterproScan.

• Competence protein (Competence) (201-464)

• Metallo-beta-lactamase superfamily (Lactamase_B) (502-686)

• Domain of unknown function (DUF4131) (DUF4131) (27-168)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	55.712	95.424	0.532