Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   HG697_RS09385 Genome accession   NZ_CP051623
Coordinates   1899062..1900771 (-) Length   569 a.a.
NCBI ID   WP_003053361.1    Uniprot ID   A0ABU0A4B9
Organism   Streptococcus dysgalactiae subsp. equisimilis strain TPCH-A19     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1894062..1905771
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HG697_RS09365 (HG697_09370) radA 1894394..1895755 (-) 1362 WP_041781622.1 DNA repair protein RadA Machinery gene
  HG697_RS09370 (HG697_09375) - 1895838..1896284 (-) 447 WP_003053378.1 dUTP diphosphatase -
  HG697_RS09375 (HG697_09380) - 1896392..1897159 (-) 768 WP_015058074.1 epoxyqueuosine reductase QueH -
  HG697_RS09380 (HG697_09385) - 1897278..1899062 (-) 1785 WP_015058075.1 ABC transporter ATP-binding protein -
  HG697_RS09385 (HG697_09390) rcrP 1899062..1900771 (-) 1710 WP_003053361.1 ABC transporter ATP-binding protein Regulator
  HG697_RS09390 (HG697_09395) rcrR 1900764..1901213 (-) 450 WP_003053369.1 MarR family transcriptional regulator Regulator
  HG697_RS09395 (HG697_09400) - 1901414..1902430 (+) 1017 WP_015058076.1 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase -
  HG697_RS09400 (HG697_09405) hasC 1902462..1903364 (+) 903 WP_003061497.1 UTP--glucose-1-phosphate uridylyltransferase HasC -
  HG697_RS09405 (HG697_09410) - 1903545..1904243 (+) 699 WP_015058077.1 DUF6198 family protein -
  HG697_RS09410 (HG697_09415) - 1904349..1905023 (-) 675 WP_003053389.1 rhomboid family intramembrane serine protease -
  HG697_RS09415 (HG697_09420) - 1905020..1905547 (-) 528 WP_012767579.1 5-formyltetrahydrofolate cyclo-ligase -

Sequence

Protein


Download         Length: 569 a.a.        Molecular weight: 63345.98 Da        Isoelectric Point: 5.6522

>NTDB_id=385853 HG697_RS09385 WP_003053361.1 1899062..1900771(-) (rcrP) [Streptococcus dysgalactiae subsp. equisimilis strain TPCH-A19]
MLKEAILRYKWYALGSLIMIIGVVASSLLQPHYLKDVLSAVIQNNQDKIYNVGILLLIIALMGLIAGAVNTILAAKIAQG
VSADIREKTFRKIQSFSYANVEAFNAGNLVVRMTNDINQIQNLVMMLFQVLFRLPILFIGAFIMAVQTLPDLWWVIVLMV
ILIGLIMALVMSQMGPRFGKFQKLMDKINRIAKENLRGVRVVKSFVQEREQYAKFKETSNELLDLNLFIGYGFSLMQPAL
MLVSYLAVYVSIYMVSGMVETDPTVIGNIASFMTYMMQIMFSIIMVGFMGMQASRAFVSIGRLKEVLDTESTMTFDTEQE
EEVSGSIVFEDVSFTYPNDDEPTLRHISFRIEPGQMVGVVGATGAGKSTLAQLIPRLFDPQEGQILLGGKPIKSLSQATL
RQTVSIVLQKAILFSGTIADNLRQGSATADDYAMERAARIAQAKEFIDRMDDRYESQVEERGNNFSGGQKQRMSIARGVI
NQPKILVLDDSTSALDAKSERLVQEALNKELKETTTVIIAQKISSVVKADKILVLDQGQLIGEGTHAELVANNAIYREIY
ETQKGKEED

Nucleotide


Download         Length: 1710 bp        

>NTDB_id=385853 HG697_RS09385 WP_003053361.1 1899062..1900771(-) (rcrP) [Streptococcus dysgalactiae subsp. equisimilis strain TPCH-A19]
ATGCTTAAAGAAGCGATTTTGCGTTACAAATGGTACGCATTGGGCTCGCTCATCATGATTATTGGGGTGGTAGCGAGCAG
TTTGCTTCAGCCTCATTATTTAAAAGATGTGCTGAGTGCTGTTATTCAAAATAACCAAGATAAGATTTACAATGTGGGGA
TATTGTTGCTTATCATTGCGCTGATGGGATTGATTGCAGGGGCAGTTAATACTATTTTAGCTGCTAAGATTGCTCAAGGG
GTCTCAGCGGATATTCGTGAGAAGACCTTCCGAAAAATTCAGAGTTTTTCTTATGCCAATGTAGAAGCTTTCAATGCTGG
GAACCTCGTGGTTCGGATGACCAATGATATTAATCAAATTCAAAATTTGGTAATGATGCTGTTTCAAGTGCTTTTTCGTC
TGCCGATTCTCTTTATTGGAGCTTTTATCATGGCGGTGCAGACCCTACCTGACTTGTGGTGGGTGATTGTGCTGATGGTT
ATTTTAATTGGTCTTATCATGGCTTTGGTCATGAGTCAGATGGGCCCACGTTTTGGGAAATTCCAAAAGTTGATGGACAA
GATCAATCGAATTGCTAAGGAAAATCTTCGTGGCGTGCGTGTGGTTAAATCTTTTGTGCAAGAACGGGAACAATATGCCA
AATTTAAAGAAACGTCCAATGAACTATTAGATTTGAATCTCTTTATCGGCTACGGTTTTTCGTTGATGCAACCTGCTTTA
ATGTTGGTATCTTATTTGGCAGTGTATGTGTCCATCTATATGGTTTCAGGCATGGTTGAAACAGATCCTACCGTTATTGG
GAATATTGCTTCTTTCATGACTTATATGATGCAAATCATGTTTTCAATTATCATGGTTGGCTTTATGGGCATGCAAGCAA
GTCGTGCCTTTGTCTCTATTGGTCGTCTCAAAGAGGTGCTAGATACTGAGTCAACCATGACCTTTGACACCGAGCAAGAA
GAAGAGGTTTCAGGTAGTATTGTCTTTGAGGATGTCAGCTTTACTTATCCTAATGATGATGAGCCGACCTTACGCCATAT
TTCCTTTAGGATTGAACCTGGTCAAATGGTTGGTGTTGTCGGTGCTACTGGTGCTGGGAAGTCTACACTGGCACAGCTTA
TTCCGCGCTTGTTTGACCCGCAAGAAGGTCAAATCTTGCTGGGAGGCAAACCGATTAAATCCTTGAGCCAAGCGACTCTT
CGTCAAACGGTTTCTATCGTGTTGCAAAAGGCTATTCTTTTTTCGGGAACCATTGCAGACAATCTCCGTCAAGGATCAGC
AACTGCAGATGATTATGCCATGGAACGAGCAGCGCGTATTGCTCAAGCCAAAGAATTTATCGATCGTATGGATGACCGCT
ATGAAAGCCAAGTGGAAGAACGGGGCAATAACTTCTCTGGTGGTCAAAAACAACGAATGTCGATTGCGCGTGGTGTTATT
AACCAACCTAAGATTCTTGTATTGGATGACTCAACATCGGCTCTGGATGCCAAGTCAGAAAGATTAGTTCAAGAAGCCTT
GAATAAAGAGTTGAAAGAGACCACCACAGTGATCATTGCCCAAAAAATTTCGTCAGTGGTAAAGGCTGATAAGATTTTAG
TTCTCGATCAGGGCCAACTGATTGGCGAAGGAACTCATGCTGAGTTGGTAGCTAATAATGCGATTTATCGTGAAATTTAT
GAGACCCAAAAAGGGAAGGAGGAAGACTAA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(16-282)

ABC transporter (ABC_tran)

(344-493)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

34.915

100

0.362