Detailed information NTG0384649

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: FLQ07_RS06020
• Genome accession: NZ_CP043501
• Coordinates: 1182736..1183848 (+)
• Length: 370 a.a.
• NCBI ID: WP_003178089.1
• Uniprot ID: A0A415J9T0
• Organism: Bacillus paralicheniformis strain A4-3
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1177736..1188848

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FLQ07_RS05995 (FLQ07_05995)	rnpA	1178464..1178823 (-)	360	WP_020453656.1	ribonuclease P protein component	-
FLQ07_RS06000 (FLQ07_06000)	rpmH	1178908..1179042 (-)	135	WP_003178075.1	50S ribosomal protein L34	-
FLQ07_RS06005 (FLQ07_06005)	dnaA	1179683..1181023 (+)	1341	WP_023856797.1	chromosomal replication initiator protein DnaA	-
FLQ07_RS06010 (FLQ07_06010)	dnaN	1181201..1182337 (+)	1137	WP_023856796.1	DNA polymerase III subunit beta	-
FLQ07_RS06015 (FLQ07_06015)	yaaA	1182504..1182719 (+)	216	WP_003178084.1	S4 domain-containing protein YaaA	-
FLQ07_RS06020 (FLQ07_06020)	recF	1182736..1183848 (+)	1113	WP_003178089.1	DNA replication/repair protein RecF	Machinery gene
FLQ07_RS06025 (FLQ07_06025)	-	1183866..1184108 (+)	243	WP_023856795.1	extracellular matrix/biofilm biosynthesis regulator RemA family protein	-
FLQ07_RS06030 (FLQ07_06030)	gyrB	1184169..1186082 (+)	1914	WP_031305110.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	-
FLQ07_RS06035 (FLQ07_06035)	gyrA	1186274..1188742 (+)	2469	WP_023856793.1	DNA gyrase subunit A	-

Sequence

Protein

• Length: 370 a.a.
• Molecular weight: 42482.33 Da
• Isoelectric Point: 6.7331

>NTDB_id=384649 FLQ07_RS06020 WP_003178089.1 1182736..1183848(+) (recF) [Bacillus paralicheniformis strain A4-3]
MYIQNLTLSSYRNYERLDLQFENKVNVIIGENAQGKTNLMEAIYVLAMAKSHRTSNDKELIRWDEDYAKIEGRVIKKNGS
VPIQLVISKKGKKGKVNHIEQQKLSQYVGAVNTIMFAPEDLNLVKGSPQVRRRFLDMEIGQVSPVYLHDLSLYQKILSQR
NHFLKQLQTRKQTDQTMLDVLTEQLTEFAAKVVMKRLQFVDQLEKWAQPIHSGISRGLEELTLKYHTSLHVSDSPDLSKM
INSYQETFSKLRDKEIERGVSLSGPHRDDVLFYVNGRDVQTYGSQGQQRTTALSLKLAEIDLIQEEIGEYPILLLDDVLS
ELDDYRQSHLLHTIQGRVQTFVTTTSVDGIDHKTLNEAEIFRVENGTLSD

Nucleotide

• Length: 1113 bp

>NTDB_id=384649 FLQ07_RS06020 WP_003178089.1 1182736..1183848(+) (recF) [Bacillus paralicheniformis strain A4-3]
TTGTATATCCAAAATCTTACATTATCATCTTACCGTAATTATGAGCGCCTTGACCTTCAATTTGAGAACAAAGTGAATGT
GATTATCGGAGAGAACGCTCAAGGAAAAACGAATTTGATGGAAGCGATCTATGTGCTTGCGATGGCGAAATCCCATCGGA
CGTCAAATGATAAAGAACTCATACGATGGGATGAAGACTATGCTAAAATAGAAGGCAGGGTCATTAAAAAAAACGGTTCT
GTTCCCATTCAGCTCGTGATTTCCAAAAAAGGAAAAAAAGGTAAAGTCAATCATATTGAACAGCAGAAGCTGAGCCAGTA
TGTCGGGGCTGTCAACACGATTATGTTCGCGCCGGAGGATTTAAATCTTGTAAAAGGAAGTCCTCAGGTCAGAAGAAGGT
TTCTCGATATGGAAATCGGCCAAGTATCACCTGTCTATCTTCATGACCTTTCTCTTTACCAAAAAATCCTTTCACAACGG
AATCATTTCCTGAAACAGCTTCAAACGAGAAAGCAAACCGACCAAACGATGCTTGACGTGCTGACGGAACAGCTTACGGA
ATTCGCGGCAAAGGTTGTGATGAAACGGCTTCAGTTTGTCGATCAGCTTGAAAAATGGGCTCAGCCCATTCATTCCGGAA
TTTCAAGAGGTCTGGAAGAGCTGACGTTAAAGTATCATACGTCTCTTCACGTATCAGATTCGCCCGATTTGTCGAAAATG
ATCAATAGTTATCAAGAAACGTTTTCTAAATTAAGAGATAAAGAAATAGAACGGGGGGTATCTCTGTCAGGTCCCCACAG
GGATGATGTTCTCTTCTACGTCAATGGCCGTGATGTGCAGACTTACGGATCGCAGGGCCAGCAGCGAACGACTGCTTTGT
CGCTTAAATTGGCTGAAATCGATTTGATTCAGGAAGAGATAGGAGAATATCCGATTCTGCTTTTGGATGATGTTTTATCA
GAGCTGGACGACTATCGGCAGTCTCACTTGCTCCACACCATTCAAGGCCGTGTTCAAACATTCGTAACAACGACAAGCGT
TGATGGAATTGATCATAAAACCTTAAACGAAGCGGAAATCTTTCGAGTTGAAAATGGCACGCTATCGGACTGA

Domains

Predicted by InterproScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (2-346)

3D structure

• AlphaFold DB: A0A415J9T0

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Bacillus subtilis subsp. subtilis str. 168	89.13	99.459	0.886