Detailed information    

insolico Bioinformatically predicted

Overview

Name   brsR   Type   Regulator
Locus tag   FY406_RS02300 Genome accession   NZ_CP043405
Coordinates   492306..492740 (+) Length   144 a.a.
NCBI ID   WP_003089903.1    Uniprot ID   -
Organism   Streptococcus ratti strain ATCC 31377     
Function   antagonizing the proteolysis of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 487306..497740
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FY406_RS02280 (FY406_02280) - 489249..490781 (-) 1533 WP_302048532.1 DUF2079 domain-containing protein -
  FY406_RS10570 - 490861..490989 (-) 129 WP_003089897.1 hypothetical protein -
  FY406_RS02285 (FY406_02285) - 491059..491364 (-) 306 WP_003089898.1 DUF1292 domain-containing protein -
  FY406_RS02290 (FY406_02290) ruvX 491454..491873 (-) 420 WP_003090938.1 Holliday junction resolvase RuvX -
  FY406_RS02295 (FY406_02295) - 491870..492139 (-) 270 WP_003089901.1 IreB family regulatory phosphoprotein -
  FY406_RS02300 (FY406_02300) brsR 492306..492740 (+) 435 WP_003089903.1 LytTR family DNA-binding domain-containing protein Regulator
  FY406_RS02305 (FY406_02305) brsM 492755..493201 (+) 447 WP_003089904.1 DUF3021 domain-containing protein Regulator
  FY406_RS02310 (FY406_02310) - 493408..493827 (-) 420 WP_003089906.1 hypothetical protein -
  FY406_RS02315 (FY406_02315) spx 494415..494813 (-) 399 WP_003089907.1 transcriptional regulator Spx -
  FY406_RS02320 (FY406_02320) recA 494898..496046 (-) 1149 WP_003089908.1 recombinase RecA Machinery gene
  FY406_RS02325 (FY406_02325) cinA 496089..497345 (-) 1257 WP_003089911.1 competence/damage-inducible protein A Machinery gene

Sequence

Protein


Download         Length: 144 a.a.        Molecular weight: 17348.37 Da        Isoelectric Point: 10.3498

>NTDB_id=383552 FY406_RS02300 WP_003089903.1 492306..492740(+) (brsR) [Streptococcus ratti strain ATCC 31377]
MKLEVIRDSQLKETLIKIYTAQIDLQTQEIIDFIEKKPYFIYGYKNKRLEFIKPENIIRIFTENKQVFIQTPTDTYLAKQ
RIYDFEQHLNTNFIRISQGEIINIKYIKQLDLTIKGSIEVRLKNGLVSFVSRRSIRRFKEKLKL

Nucleotide


Download         Length: 435 bp        

>NTDB_id=383552 FY406_RS02300 WP_003089903.1 492306..492740(+) (brsR) [Streptococcus ratti strain ATCC 31377]
ATGAAGCTAGAAGTTATTAGGGACTCTCAATTAAAAGAAACCCTGATCAAAATTTACACGGCCCAGATCGATTTACAAAC
TCAGGAAATTATTGATTTTATTGAGAAGAAACCTTATTTTATCTACGGTTATAAAAACAAACGGCTGGAATTTATCAAAC
CTGAAAATATTATTCGGATTTTCACTGAAAACAAGCAGGTTTTCATCCAAACCCCGACGGATACTTATCTGGCCAAACAA
CGAATTTATGACTTTGAACAGCACTTAAATACAAATTTCATTCGGATTTCGCAGGGAGAGATTATCAACATCAAATACAT
AAAACAACTAGATCTAACGATAAAAGGAAGCATTGAAGTAAGGCTAAAAAATGGTCTCGTCAGTTTTGTATCCAGACGCA
GCATAAGACGCTTTAAAGAAAAATTAAAACTTTAA

Domains

Predicted by InterproScan.

LytTr DNA-binding domain (LytTR)

(48-142)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  brsR Streptococcus mutans UA159

70.833

100

0.708

Multiple sequence alignment