Detailed information NTG0038203

Bioinformatically predicted

Overview

• Name: comEC
• Type: Machinery gene
• Locus tag: BSUW23_RS12860
• Genome accession: NC_014479
• Coordinates: 2493520..2495850 (-)
• Length: 776 a.a.
• NCBI ID: WP_003226149.1
• Uniprot ID: -
• Organism: Bacillus spizizenii str. W23
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2488520..2500850

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BSUW23_RS12830 (BSUW23_12650)	-	2488858..2489196 (-)	339	WP_003226161.1	YqxA family protein	-
BSUW23_RS12835 (BSUW23_12655)	spoIIP	2489213..2490418 (-)	1206	WP_003226159.1	spore autolysin SpoIIP	-
BSUW23_RS12840 (BSUW23_12660)	gpr	2490481..2491587 (-)	1107	WP_003226157.1	GPR endopeptidase	-
BSUW23_RS12845 (BSUW23_12665)	rpsT	2491791..2492057 (+)	267	WP_003226155.1	30S ribosomal protein S20	-
BSUW23_RS12850 (BSUW23_12670)	holA	2492072..2493115 (-)	1044	WP_003226154.1	DNA polymerase III subunit delta	-
BSUW23_RS21300	-	2493155..2493304 (-)	150	WP_136975859.1	hypothetical protein	-
BSUW23_RS12855 (BSUW23_12680)	-	2493345..2493479 (+)	135	WP_003226152.1	YqzM family protein	-
BSUW23_RS12860 (BSUW23_12685)	comEC	2493520..2495850 (-)	2331	WP_003226149.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
BSUW23_RS12865 (BSUW23_12690)	-	2495854..2496423 (-)	570	WP_003226147.1	ComE operon protein 2	-
BSUW23_RS12870 (BSUW23_12695)	comEA	2496490..2497107 (-)	618	WP_003226145.1	helix-hairpin-helix domain-containing protein	Machinery gene
BSUW23_RS12875 (BSUW23_12700)	comER	2497191..2498012 (+)	822	WP_003226143.1	late competence protein ComER	-
BSUW23_RS12880 (BSUW23_12705)	-	2498078..2498821 (-)	744	WP_003226141.1	class I SAM-dependent methyltransferase	-
BSUW23_RS12885 (BSUW23_12710)	rsfS	2498818..2499174 (-)	357	WP_003226139.1	ribosome silencing factor	-
BSUW23_RS12890 (BSUW23_12715)	yqeK	2499192..2499752 (-)	561	WP_003226137.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
BSUW23_RS12895 (BSUW23_12720)	-	2499742..2500311 (-)	570	WP_003226135.1	nicotinate-nucleotide adenylyltransferase	-
BSUW23_RS12900 (BSUW23_12725)	yhbY	2500323..2500613 (-)	291	WP_003226133.1	ribosome assembly RNA-binding protein YhbY	-

Sequence

Protein

• Length: 776 a.a.
• Molecular weight: 86621.22 Da
• Isoelectric Point: 7.9910

>NTDB_id=38203 BSUW23_RS12860 WP_003226149.1 2493520..2495850(-) (comEC) [Bacillus spizizenii str. W23]
MRNSRLLLPLAAASATAGITAAAYFSAVFLFFLFLLIVLIKTRHAFLIFVCFFSFILFFSLYAVTDSQNVSLYQRGTYQF
KAVIDSIPKIDGDRMSMVVKTPDSEKWAASYRIQSADEKDRLSYIEPGMACELTGSLEEPKHSTVPGTFDYNEYLYQQHI
HWNYSVTSIQNCSEPANFMYKLLSLRKYIISFTNDLLPPNSAGIVQALTVGDRFNVEDEVLNAYQKIGVVHLLAISGLHI
GILTAGLFYIMIRIGITREKASIMLLLFLPLYVVLTGAAPSVLRAALMSGIYLAGSLVKWRVHSAGAVCLSYIVLLLFNP
YYLFEAGFQLSFAVSFSLILSSSIFKRVKTFLGQLAMVSMIAQLGSLPILLYHFQQFSIISIPMNMVLVPFYTFCVLPGA
IAGVFLLSLSVSAGRLFFGWFDFLMSWANKLITKIAEIDVFTIIIARPAPALLFLFIATIILLLMAIEKRSFSQLMVTGG
MCCAVLSLLFIYPRLSSEGEVDMIDIGQGDSMYVGAPHQRGHVLIDTGGTLPYLSEPWREKQHPFSLGEKVLIPFLTAKG
IKQLDALILTHADQDHIGEAETLLKHHKVKRLVIPKGFVSEPKDEKVLQAAREEGVPIEEVKRGDVLQIKDLQFHVLSPE
TPDPASKNNSSLVLWMKTGGMSWVLTGDLEKEGEQEVMNVFPNIKADVLKVGHHGSKGSTGEEFIKQLQPKTAIISAGIN
NRYHHPHQEVLQLLQRHSIRVLRTDQNGTIQYRYKNRVGTFSVYSPYDTSDIAETN

Nucleotide

• Length: 2331 bp

>NTDB_id=38203 BSUW23_RS12860 WP_003226149.1 2493520..2495850(-) (comEC) [Bacillus spizizenii str. W23]
ATGCGTAATTCGCGTTTGTTATTGCCTTTGGCGGCAGCTTCGGCAACTGCTGGAATTACTGCCGCCGCTTATTTCTCCGC
TGTTTTTCTCTTCTTCCTCTTTCTCCTCATCGTTTTAATCAAAACGAGACACGCTTTTCTCATTTTTGTTTGTTTCTTCT
CTTTTATATTGTTTTTTTCACTGTATGCAGTCACAGACTCCCAGAATGTCTCTTTATATCAGCGGGGCACCTATCAATTC
AAGGCAGTGATTGACAGTATTCCTAAAATTGATGGTGACCGTATGTCTATGGTAGTTAAGACGCCTGATAGTGAAAAATG
GGCCGCATCGTATCGCATTCAGTCTGCTGATGAAAAAGATCGGCTTTCATACATAGAACCAGGAATGGCATGTGAATTAA
CTGGTTCATTGGAAGAACCGAAACATTCAACTGTGCCGGGTACATTTGATTATAACGAATATCTTTACCAACAGCATATT
CACTGGAACTACTCTGTCACATCAATCCAAAATTGCAGCGAACCTGCAAATTTTATGTATAAGCTGCTCAGTTTGAGAAA
ATACATTATATCATTCACAAACGACCTGCTGCCTCCTAATTCGGCAGGAATCGTACAAGCACTTACAGTCGGTGACAGAT
TTAATGTGGAAGACGAAGTGCTTAACGCGTATCAAAAGATTGGTGTCGTCCATCTCTTGGCGATTTCAGGACTCCACATT
GGCATTTTGACAGCCGGCTTGTTTTATATCATGATCCGTATTGGTATAACAAGAGAAAAGGCGTCAATCATGTTGCTGTT
ATTTCTGCCGCTCTATGTGGTGTTGACGGGCGCTGCTCCTTCAGTGCTTCGCGCCGCTCTGATGTCGGGAATTTACTTAG
CAGGAAGTCTCGTGAAATGGCGTGTACATTCAGCCGGTGCTGTCTGCCTTTCATATATTGTCCTCTTGCTCTTCAATCCT
TACTATCTCTTCGAAGCCGGTTTTCAGCTGTCGTTCGCCGTCAGTTTTTCTTTAATACTTTCCTCTTCTATTTTTAAGCG
TGTCAAAACCTTCTTAGGTCAGCTGGCAATGGTATCGATGATCGCTCAGCTGGGCTCACTTCCTATTCTCCTGTATCATT
TCCAGCAGTTTTCTATAATTAGCATACCGATGAACATGGTGCTGGTTCCTTTTTATACATTCTGCGTTTTGCCGGGAGCT
ATAGCAGGTGTTTTTCTATTAAGCCTTTCCGTTTCTGCCGGTCGATTGTTTTTCGGCTGGTTTGATTTCTTGATGAGCTG
GGCCAACAAGCTCATCACAAAAATTGCAGAGATTGATGTATTCACGATCATCATTGCACGCCCCGCACCTGCTCTGCTCT
TTTTGTTCATAGCCACGATAATCCTATTGCTTATGGCGATTGAAAAACGCTCCTTTTCGCAGCTGATGGTAACTGGCGGC
ATGTGTTGCGCTGTGCTCAGTCTTCTCTTTATTTATCCTCGTCTTAGTTCTGAAGGAGAGGTCGATATGATTGATATTGG
GCAGGGTGACAGCATGTATGTAGGTGCTCCGCATCAGCGAGGCCATGTCTTAATTGATACTGGCGGCACTTTGCCTTACT
TGTCAGAGCCTTGGCGGGAAAAACAGCACCCGTTTTCACTGGGAGAAAAGGTGCTGATTCCGTTTTTAACTGCTAAGGGA
ATTAAACAGCTTGATGCTTTAATTCTGACGCACGCTGACCAAGATCATATTGGAGAGGCGGAGACTCTGCTGAAGCATCA
TAAAGTGAAGCGCCTAGTGATTCCGAAAGGGTTCGTTTCTGAACCTAAAGACGAAAAAGTGCTGCAGGCTGCCAGAGAGG
AGGGAGTGCCAATTGAAGAGGTGAAGCGAGGCGATGTATTGCAAATAAAGGACTTGCAGTTCCATGTACTGTCACCGGAA
ACACCTGACCCGGCAAGCAAAAATAATTCTTCTCTCGTTCTGTGGATGAAAACGGGCGGTATGAGCTGGGTATTGACGGG
GGATCTGGAGAAAGAAGGAGAACAGGAGGTAATGAACGTGTTTCCAAATATAAAAGCGGATGTATTAAAGGTGGGGCACC
ATGGAAGCAAAGGCTCTACCGGTGAAGAATTCATCAAACAGCTTCAGCCGAAAACAGCCATTATCTCGGCGGGGATAAAC
AATCGGTACCATCATCCCCATCAAGAAGTTCTGCAATTATTACAAAGACATTCCATCCGCGTGCTCCGCACCGATCAAAA
CGGAACAATCCAATATAGATATAAAAACAGAGTTGGAACCTTTTCTGTCTATTCTCCATATGATACATCAGATATAGCAG
AGACGAACTAA

Domains

Predicted by InterproScan.

• Domain of unknown function (DUF4131) (DUF4131) (20-170)

• Metallo-beta-lactamase superfamily (Lactamase_B) (507-718)

• Competence protein (Competence) (208-469)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC	Bacillus subtilis subsp. subtilis str. 168	88.144	100	0.881