Detailed information NTG0377191

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: FOZ74_RS11700
• Genome accession: NZ_CP042344
• Coordinates: 2446646..2447770 (-)
• Length: 374 a.a.
• NCBI ID: WP_146913226.1
• Uniprot ID: A0A5B8RVR6
• Organism: Comamonas flocculans strain NLF-7-7
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2441646..2452770

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FOZ74_RS11670 (FOZ74_11670)	pal	2442235..2442741 (+)	507	WP_146913221.1	peptidoglycan-associated lipoprotein Pal	-
FOZ74_RS11675 (FOZ74_11675)	ybgF	2442755..2443510 (+)	756	WP_146913222.1	tol-pal system protein YbgF	-
FOZ74_RS11680 (FOZ74_11680)	-	2443507..2444301 (+)	795	WP_146913223.1	tRNA threonylcarbamoyladenosine dehydratase	-
FOZ74_RS11690 (FOZ74_11690)	-	2444567..2444902 (+)	336	WP_146913224.1	serine/threonine protein kinase	-
FOZ74_RS11695 (FOZ74_11695)	-	2445020..2446624 (+)	1605	WP_146913225.1	AMP-binding protein	-
FOZ74_RS11700 (FOZ74_11700)	pilA	2446646..2447770 (-)	1125	WP_146913226.1	signal recognition particle-docking protein FtsY	Machinery gene
FOZ74_RS11705 (FOZ74_11705)	-	2447800..2449248 (+)	1449	WP_146913227.1	pitrilysin family protein	-
FOZ74_RS11710 (FOZ74_11710)	-	2449261..2450658 (+)	1398	WP_146913228.1	pitrilysin family protein	-
FOZ74_RS11715 (FOZ74_11715)	rsmD	2450655..2451242 (+)	588	WP_146913229.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
FOZ74_RS11720 (FOZ74_11720)	coaD	2451336..2451830 (+)	495	WP_146913230.1	pantetheine-phosphate adenylyltransferase	-

Sequence

Protein

• Length: 374 a.a.
• Molecular weight: 38798.64 Da
• Isoelectric Point: 8.4739

>NTDB_id=377191 FOZ74_RS11700 WP_146913226.1 2446646..2447770(-) (pilA) [Comamonas flocculans strain NLF-7-7]
MFSFFKKKTPPPAAPAAPAPPEAPPAGGQPSPPPAAAPAPVPAPEPAAPAVPAAAQPPADTPADAPAPSPVTAEPARRSW
MARLSAGLRKTGSGITTVFVGTRIDEALYEELEDALLMADTGVKATTQLLQTLRRKVKEHKAADPAAVKALLADALTELL
QPLEKPLVIGAHQPTVIMVAGVNGAGKTTSIGKLTRHLADHGQSVLLAAADTFRAAAREQLGVWATRNTVDIISQQGGDP
AAVSFDAVSAGRARGKDVVLVDTAGRLPTQLHLMQELTKIRRVITKAYASAPHEVLLVIDGNTGQNALAQVKAFDEALQL
TGLIVTKLDGTAKGGVLAAIAQERPVPVYFIGVGEQVQDLQTFKAREFAEALLG

Nucleotide

• Length: 1125 bp

>NTDB_id=377191 FOZ74_RS11700 WP_146913226.1 2446646..2447770(-) (pilA) [Comamonas flocculans strain NLF-7-7]
ATGTTCAGCTTCTTCAAGAAAAAAACCCCGCCCCCTGCGGCCCCCGCCGCGCCGGCACCACCCGAGGCTCCGCCCGCCGG
TGGCCAGCCCTCCCCGCCCCCGGCCGCAGCGCCCGCGCCGGTGCCGGCACCCGAGCCAGCCGCTCCCGCCGTCCCCGCCG
CGGCACAGCCCCCCGCCGACACGCCGGCCGACGCGCCCGCTCCGTCTCCCGTCACCGCCGAGCCAGCGCGCCGGAGCTGG
ATGGCACGCCTGTCGGCCGGCCTGCGCAAGACCGGCAGCGGCATCACCACCGTGTTCGTCGGCACGCGCATCGACGAAGC
CTTGTACGAGGAACTCGAAGACGCGCTGCTCATGGCCGACACCGGCGTGAAAGCCACCACGCAGCTGCTGCAGACGCTCA
GGCGCAAGGTCAAGGAACACAAGGCGGCCGACCCGGCCGCCGTCAAGGCGCTGCTGGCCGACGCGCTGACCGAGCTGCTG
CAGCCGCTGGAAAAACCGCTGGTCATCGGCGCGCACCAGCCCACGGTGATCATGGTCGCGGGCGTCAACGGCGCGGGCAA
GACCACCTCCATCGGCAAGCTCACCCGGCACCTGGCGGACCACGGCCAGAGCGTGCTGCTGGCCGCGGCCGACACCTTCC
GCGCCGCGGCGCGCGAGCAGCTGGGCGTCTGGGCCACGCGCAACACCGTGGACATCATCAGCCAGCAGGGGGGCGACCCG
GCCGCCGTGAGCTTCGACGCGGTGAGCGCGGGCCGCGCGCGTGGCAAGGACGTGGTGCTGGTGGACACCGCCGGGCGCCT
GCCCACGCAGCTGCACCTGATGCAGGAGCTGACCAAGATCCGCCGCGTGATCACCAAGGCCTACGCCAGCGCCCCGCACG
AGGTGCTGCTGGTCATCGACGGCAACACCGGCCAGAACGCCCTCGCCCAGGTCAAGGCCTTCGACGAAGCGCTGCAGCTC
ACCGGCCTGATCGTCACCAAACTCGACGGCACCGCCAAGGGCGGCGTGCTGGCCGCCATCGCGCAGGAGCGCCCGGTGCC
GGTCTATTTCATCGGCGTGGGCGAACAGGTGCAGGACCTGCAGACCTTCAAGGCACGGGAATTCGCCGAGGCGCTGCTGG
GCTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (174-374)

• SRP54-type protein, helical bundle domain (SRP54_N) (92-156)

3D structure

• AlphaFold DB: A0A5B8RVR6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	47.837	100	0.532