Detailed information
Overview
| Name | lytF | Type | Regulator |
| Locus tag | HBA50_RS09930 | Genome accession | NZ_CP050133 |
| Coordinates | 2000710..2002656 (+) | Length | 648 a.a. |
| NCBI ID | WP_045498366.1 | Uniprot ID | - |
| Organism | Streptococcus cristatus ATCC 51100 | ||
| Function | cell lysis (predicted from homology) Cell lysis |
||
Genomic Context
Location: 1995710..2007656
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HBA50_RS09905 (HBA50_09905) | - | 1995922..1997043 (-) | 1122 | WP_045498343.1 | DUF262 domain-containing protein | - |
| HBA50_RS09910 (HBA50_09910) | - | 1997080..1997307 (-) | 228 | WP_045498347.1 | hypothetical protein | - |
| HBA50_RS09915 (HBA50_09915) | purK | 1997317..1998408 (-) | 1092 | WP_045498350.1 | 5-(carboxyamino)imidazole ribonucleotide synthase | - |
| HBA50_RS09920 (HBA50_09920) | purE | 1998395..1998883 (-) | 489 | WP_045498353.1 | 5-(carboxyamino)imidazole ribonucleotide mutase | - |
| HBA50_RS09925 (HBA50_09925) | purD | 1999072..2000334 (-) | 1263 | WP_045498364.1 | phosphoribosylamine--glycine ligase | - |
| HBA50_RS09930 (HBA50_09930) | lytF | 2000710..2002656 (+) | 1947 | WP_045498366.1 | GBS Bsp-like repeat-containing protein | Regulator |
| HBA50_RS09935 (HBA50_09935) | - | 2002723..2002965 (-) | 243 | WP_005591354.1 | acyl carrier protein | - |
| HBA50_RS09940 (HBA50_09940) | plsX | 2002962..2003966 (-) | 1005 | WP_045498369.1 | phosphate acyltransferase PlsX | - |
| HBA50_RS09945 (HBA50_09945) | recO | 2003947..2004744 (-) | 798 | WP_045498372.1 | DNA repair protein RecO | Machinery gene |
| HBA50_RS09950 (HBA50_09950) | - | 2004737..2005909 (-) | 1173 | WP_045498375.1 | pyridoxal phosphate-dependent aminotransferase | - |
| HBA50_RS09955 (HBA50_09955) | srtB | 2006021..2006851 (-) | 831 | WP_045498378.1 | class B sortase, LPKTxAVK-specific | - |
| HBA50_RS09960 (HBA50_09960) | abpA | 2006943..2007554 (-) | 612 | WP_045498381.1 | amylase-binding adhesin AbpA | - |
Sequence
Protein
Download Length: 648 a.a. Molecular weight: 71731.74 Da Isoelectric Point: 9.0961
>NTDB_id=376956 HBA50_RS09930 WP_045498366.1 2000710..2002656(+) (lytF) [Streptococcus cristatus ATCC 51100]
MKKYQKLFLLSGAVLGLFASHSTAQAVTSTKTGNKVLGPTDRASNVTVNVTGDTAQIHYARSKAQVPYTISHAVWSDENG
QDDLKWYTTPQTSSTAIDLRQHAGYGTFHVHTYININGKMIGLNGTTFTVNKPAVKVSTNIVGQTGQIHFKRNKDQINSR
ILHAVWSDENGQDDLKWYNAGQDITEFTLSNHKGYGKYFVDTYENKNGKMIYQSGTTFHLEKPNPIIQTSFPEPGIMEIL
IKNLPESMYKVTVPTWSENKGQDDLQWYQAKKNPDGSYSVRVELKKHNYDTGTYHIHLYGESYVKPELTGLAGTSVTLDA
GKMPSQKDQKPLFSVENINQEEGTYTVKVTETAASKPIQSVRVPIWSTQNQSNIKWYEASNNGDGTFSAQFNIRNHQALS
GSYTNHIYVKYKDGSEHNYATDSVTLSAENIKAKVSINKISTYNYEVTVSDAFGPGTISLPTWSEVNGQDDIKWYTANKV
GNGLYKFTINTQQHAGNGLFHTHVYRNLNGQMTGLTGTSYQVDKPTTPEPTLYTPDYAGASSYPHGQCTWGAKVLAPWAG
PYWGNGGQWAASARAAGFRTGSTPQVGAIICWTDGGYGHVGVVTHVESNTRIQIKESNYAGKQYIGNFRGWFNPYAAGQG
AVSYIYPK
MKKYQKLFLLSGAVLGLFASHSTAQAVTSTKTGNKVLGPTDRASNVTVNVTGDTAQIHYARSKAQVPYTISHAVWSDENG
QDDLKWYTTPQTSSTAIDLRQHAGYGTFHVHTYININGKMIGLNGTTFTVNKPAVKVSTNIVGQTGQIHFKRNKDQINSR
ILHAVWSDENGQDDLKWYNAGQDITEFTLSNHKGYGKYFVDTYENKNGKMIYQSGTTFHLEKPNPIIQTSFPEPGIMEIL
IKNLPESMYKVTVPTWSENKGQDDLQWYQAKKNPDGSYSVRVELKKHNYDTGTYHIHLYGESYVKPELTGLAGTSVTLDA
GKMPSQKDQKPLFSVENINQEEGTYTVKVTETAASKPIQSVRVPIWSTQNQSNIKWYEASNNGDGTFSAQFNIRNHQALS
GSYTNHIYVKYKDGSEHNYATDSVTLSAENIKAKVSINKISTYNYEVTVSDAFGPGTISLPTWSEVNGQDDIKWYTANKV
GNGLYKFTINTQQHAGNGLFHTHVYRNLNGQMTGLTGTSYQVDKPTTPEPTLYTPDYAGASSYPHGQCTWGAKVLAPWAG
PYWGNGGQWAASARAAGFRTGSTPQVGAIICWTDGGYGHVGVVTHVESNTRIQIKESNYAGKQYIGNFRGWFNPYAAGQG
AVSYIYPK
Nucleotide
Download Length: 1947 bp
>NTDB_id=376956 HBA50_RS09930 WP_045498366.1 2000710..2002656(+) (lytF) [Streptococcus cristatus ATCC 51100]
ATGAAGAAATATCAGAAGCTGTTTTTATTATCCGGAGCAGTCCTTGGGCTGTTTGCAAGTCATTCCACGGCTCAAGCTGT
TACATCGACTAAAACTGGAAACAAAGTCCTAGGCCCCACTGATCGTGCTAGCAATGTGACCGTCAATGTCACTGGGGATA
CAGCACAGATTCATTATGCCCGCTCCAAGGCTCAGGTTCCCTATACCATTTCCCACGCAGTCTGGTCCGACGAAAACGGA
CAGGATGATTTGAAATGGTACACCACGCCTCAAACATCCAGCACAGCCATTGACCTCCGGCAGCACGCTGGCTATGGCAC
TTTCCATGTTCATACTTACATTAATATCAACGGGAAAATGATTGGCTTGAATGGTACGACCTTTACTGTTAATAAGCCTG
CGGTTAAGGTTTCTACTAATATTGTCGGACAAACTGGTCAAATTCACTTTAAGCGCAATAAAGACCAGATAAACTCTCGT
ATTTTACATGCGGTCTGGTCTGATGAAAATGGACAAGATGACTTAAAATGGTATAATGCCGGACAAGATATCACCGAATT
TACACTTTCTAATCACAAGGGTTATGGAAAATATTTCGTAGATACTTATGAAAATAAAAATGGCAAAATGATTTACCAAT
CAGGCACCACTTTCCATCTAGAAAAGCCTAATCCTATCATTCAGACAAGTTTCCCTGAACCTGGCATTATGGAAATCCTT
ATCAAAAATCTTCCTGAATCCATGTATAAGGTCACTGTCCCAACCTGGTCTGAAAATAAGGGGCAAGATGATTTACAGTG
GTATCAAGCAAAGAAAAATCCTGATGGCAGTTACAGCGTCAGAGTCGAACTAAAAAAACACAATTACGATACAGGAACCT
ACCATATCCATCTCTATGGAGAAAGCTATGTTAAGCCTGAGTTAACAGGATTAGCAGGAACAAGTGTTACACTGGATGCT
GGTAAGATGCCTTCTCAAAAAGACCAAAAACCGCTTTTCTCTGTTGAAAATATCAATCAGGAAGAGGGAACCTACACTGT
AAAAGTAACCGAAACTGCAGCATCTAAGCCAATTCAATCCGTCCGCGTCCCTATTTGGAGTACCCAGAATCAAAGCAATA
TCAAGTGGTATGAGGCAAGCAACAATGGAGATGGGACTTTTTCTGCACAATTCAATATCCGTAACCACCAAGCCTTATCT
GGAAGCTACACTAATCATATCTACGTTAAGTACAAAGATGGTAGCGAGCATAACTATGCAACAGACAGCGTCACCCTATC
CGCTGAAAATATCAAAGCCAAGGTCTCTATCAATAAAATTTCTACCTACAATTACGAAGTGACCGTTTCCGATGCTTTCG
GACCAGGAACTATTTCTCTACCGACTTGGTCAGAAGTCAACGGCCAGGATGACATCAAATGGTACACTGCTAACAAAGTG
GGCAATGGCTTGTATAAATTTACCATCAATACGCAACAGCACGCTGGAAATGGACTCTTCCATACCCATGTTTACCGTAA
TCTCAATGGACAGATGACTGGACTTACAGGTACTAGCTATCAGGTTGATAAACCAACCACACCTGAGCCAACCCTCTACA
CACCTGATTATGCGGGAGCCTCCTCTTATCCTCATGGTCAGTGTACTTGGGGAGCAAAAGTACTGGCTCCTTGGGCTGGT
CCTTACTGGGGCAACGGTGGCCAATGGGCAGCTAGCGCACGCGCAGCTGGTTTCCGAACAGGAAGCACCCCACAAGTCGG
AGCCATCATCTGCTGGACCGATGGCGGCTATGGGCATGTTGGTGTTGTCACTCATGTCGAATCCAATACCCGCATCCAAA
TCAAAGAATCCAACTATGCAGGTAAACAGTATATTGGCAACTTCCGTGGCTGGTTCAATCCTTATGCCGCCGGTCAAGGA
GCTGTCAGCTATATTTATCCAAAATAA
ATGAAGAAATATCAGAAGCTGTTTTTATTATCCGGAGCAGTCCTTGGGCTGTTTGCAAGTCATTCCACGGCTCAAGCTGT
TACATCGACTAAAACTGGAAACAAAGTCCTAGGCCCCACTGATCGTGCTAGCAATGTGACCGTCAATGTCACTGGGGATA
CAGCACAGATTCATTATGCCCGCTCCAAGGCTCAGGTTCCCTATACCATTTCCCACGCAGTCTGGTCCGACGAAAACGGA
CAGGATGATTTGAAATGGTACACCACGCCTCAAACATCCAGCACAGCCATTGACCTCCGGCAGCACGCTGGCTATGGCAC
TTTCCATGTTCATACTTACATTAATATCAACGGGAAAATGATTGGCTTGAATGGTACGACCTTTACTGTTAATAAGCCTG
CGGTTAAGGTTTCTACTAATATTGTCGGACAAACTGGTCAAATTCACTTTAAGCGCAATAAAGACCAGATAAACTCTCGT
ATTTTACATGCGGTCTGGTCTGATGAAAATGGACAAGATGACTTAAAATGGTATAATGCCGGACAAGATATCACCGAATT
TACACTTTCTAATCACAAGGGTTATGGAAAATATTTCGTAGATACTTATGAAAATAAAAATGGCAAAATGATTTACCAAT
CAGGCACCACTTTCCATCTAGAAAAGCCTAATCCTATCATTCAGACAAGTTTCCCTGAACCTGGCATTATGGAAATCCTT
ATCAAAAATCTTCCTGAATCCATGTATAAGGTCACTGTCCCAACCTGGTCTGAAAATAAGGGGCAAGATGATTTACAGTG
GTATCAAGCAAAGAAAAATCCTGATGGCAGTTACAGCGTCAGAGTCGAACTAAAAAAACACAATTACGATACAGGAACCT
ACCATATCCATCTCTATGGAGAAAGCTATGTTAAGCCTGAGTTAACAGGATTAGCAGGAACAAGTGTTACACTGGATGCT
GGTAAGATGCCTTCTCAAAAAGACCAAAAACCGCTTTTCTCTGTTGAAAATATCAATCAGGAAGAGGGAACCTACACTGT
AAAAGTAACCGAAACTGCAGCATCTAAGCCAATTCAATCCGTCCGCGTCCCTATTTGGAGTACCCAGAATCAAAGCAATA
TCAAGTGGTATGAGGCAAGCAACAATGGAGATGGGACTTTTTCTGCACAATTCAATATCCGTAACCACCAAGCCTTATCT
GGAAGCTACACTAATCATATCTACGTTAAGTACAAAGATGGTAGCGAGCATAACTATGCAACAGACAGCGTCACCCTATC
CGCTGAAAATATCAAAGCCAAGGTCTCTATCAATAAAATTTCTACCTACAATTACGAAGTGACCGTTTCCGATGCTTTCG
GACCAGGAACTATTTCTCTACCGACTTGGTCAGAAGTCAACGGCCAGGATGACATCAAATGGTACACTGCTAACAAAGTG
GGCAATGGCTTGTATAAATTTACCATCAATACGCAACAGCACGCTGGAAATGGACTCTTCCATACCCATGTTTACCGTAA
TCTCAATGGACAGATGACTGGACTTACAGGTACTAGCTATCAGGTTGATAAACCAACCACACCTGAGCCAACCCTCTACA
CACCTGATTATGCGGGAGCCTCCTCTTATCCTCATGGTCAGTGTACTTGGGGAGCAAAAGTACTGGCTCCTTGGGCTGGT
CCTTACTGGGGCAACGGTGGCCAATGGGCAGCTAGCGCACGCGCAGCTGGTTTCCGAACAGGAAGCACCCCACAAGTCGG
AGCCATCATCTGCTGGACCGATGGCGGCTATGGGCATGTTGGTGTTGTCACTCATGTCGAATCCAATACCCGCATCCAAA
TCAAAGAATCCAACTATGCAGGTAAACAGTATATTGGCAACTTCCGTGGCTGGTTCAATCCTTATGCCGCCGGTCAAGGA
GCTGTCAGCTATATTTATCCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| lytF | Streptococcus gordonii strain NCTC7865 |
45.333 |
81.019 |
0.367 |
| lytF | Streptococcus gordonii str. Challis substr. CH1 |
45.385 |
80.247 |
0.364 |