Detailed information NTG0375964

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: FFI87_RS14780
• Genome accession: NZ_CP042177
• Coordinates: 3101986..3103146 (+)
• Length: 386 a.a.
• NCBI ID: WP_012364740.1
• Uniprot ID: B1YN59
• Organism: Burkholderia sp. KBS0801
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3096986..3108146

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FFI87_RS14745 (FFI87_014750)	-	3097603..3098211 (+)	609	WP_006753282.1	50S ribosomal protein L25/general stress protein Ctc	-
FFI87_RS14755 (FFI87_014760)	pth	3098341..3098940 (+)	600	WP_006760396.1	aminoacyl-tRNA hydrolase	-
FFI87_RS14760 (FFI87_014765)	hisC	3099066..3100133 (+)	1068	WP_138847134.1	histidinol-phosphate transaminase	-
FFI87_RS14765 (FFI87_014770)	-	3100238..3100504 (-)	267	WP_006760398.1	YfhL family 4Fe-4S dicluster ferredoxin	-
FFI87_RS14770 (FFI87_014775)	coaD	3100564..3101061 (-)	498	WP_006398238.1	pantetheine-phosphate adenylyltransferase	-
FFI87_RS14775 (FFI87_014780)	rsmD	3101173..3101787 (-)	615	WP_012364739.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
FFI87_RS14780 (FFI87_014785)	pilA	3101986..3103146 (+)	1161	WP_012364740.1	signal recognition particle-docking protein FtsY	Machinery gene
FFI87_RS14785 (FFI87_014790)	maiA	3103258..3103902 (-)	645	WP_012364741.1	maleylacetoacetate isomerase	-
FFI87_RS14790 (FFI87_014795)	ybiB	3104092..3105066 (+)	975	WP_138847133.1	DNA-binding protein YbiB	-
FFI87_RS14795 (FFI87_014800)	leuA	3105472..3107118 (+)	1647	WP_138847132.1	2-isopropylmalate synthase	-
FFI87_RS14800 (FFI87_014805)	-	3107261..3107644 (-)	384	WP_011657982.1	nuclear transport factor 2 family protein	-

Sequence

Protein

• Length: 386 a.a.
• Molecular weight: 41198.06 Da
• Isoelectric Point: 4.8762

>NTDB_id=375964 FFI87_RS14780 WP_012364740.1 3101986..3103146(+) (pilA) [Burkholderia sp. KBS0801]
MFSFFKRFKKTQESDSTESQSADALQPDEPSDAPAADARQAIEAPPPPAQPRPAAPAVVMTVTPTNDGSDDVVEAVEIVP
PPTQDASAKKSWLTRLKTGLAKTGSSITGVFVNTKIDEDLYEELEAALLMSDAGVDATEYLLGALREKVKTGRLTDPQQV
KSALHDLLVELLKPLEKSLMLGRAQPLVMMITGVNGAGKTTSIGKLAKHLQSFDQSVLLAAGDTFRAAAREQLAVWGERN
NVTVVQQESGDPAAVIFDAVSAARARKIDVMMADTAGRLPTQLHLMEELKKVKRVISKAHDGAPHEVLLVIDANTGQNAL
TQVKAFDDALGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEKVEDLQPFSAVEFADALFD

Nucleotide

• Length: 1161 bp

>NTDB_id=375964 FFI87_RS14780 WP_012364740.1 3101986..3103146(+) (pilA) [Burkholderia sp. KBS0801]
ATGTTCAGCTTCTTCAAACGATTCAAGAAAACGCAGGAGTCCGACTCCACGGAATCGCAATCGGCCGACGCGCTGCAACC
GGACGAGCCGTCCGACGCGCCCGCAGCCGATGCCCGTCAGGCGATCGAAGCCCCGCCCCCCCCCGCGCAACCGCGACCGG
CCGCGCCGGCCGTCGTGATGACGGTCACGCCGACCAACGACGGTAGCGACGACGTCGTCGAAGCGGTCGAGATCGTGCCG
CCGCCGACGCAGGACGCCTCCGCGAAGAAATCGTGGCTCACCCGCCTGAAAACGGGGCTCGCGAAGACGGGTTCGAGCAT
CACCGGCGTGTTCGTCAACACGAAGATCGACGAGGATCTGTACGAGGAACTCGAAGCCGCGCTGCTGATGTCCGACGCCG
GCGTCGATGCGACCGAGTACCTGCTCGGGGCGCTGCGCGAGAAAGTGAAAACGGGCCGGCTGACCGATCCGCAGCAAGTG
AAGAGCGCGCTGCACGACCTGCTCGTCGAACTGCTGAAGCCGCTCGAGAAATCGCTGATGCTCGGCCGCGCGCAGCCGCT
CGTGATGATGATCACGGGCGTGAACGGCGCGGGCAAGACCACCAGCATCGGCAAGCTCGCGAAGCATCTGCAGAGCTTCG
ACCAGTCGGTGCTGCTGGCCGCGGGCGACACGTTCCGCGCGGCCGCGCGCGAGCAGCTGGCGGTCTGGGGCGAACGCAAC
AACGTGACGGTCGTCCAGCAGGAAAGCGGTGACCCGGCCGCGGTGATTTTCGACGCGGTCAGCGCCGCGCGCGCGCGCAA
GATCGACGTGATGATGGCCGACACGGCCGGCCGCCTGCCGACGCAGCTGCACCTGATGGAAGAGCTGAAGAAGGTGAAGC
GCGTGATCTCGAAGGCGCACGACGGCGCGCCGCACGAGGTGCTGCTCGTGATCGACGCGAACACCGGCCAGAACGCGCTC
ACGCAGGTGAAGGCCTTCGACGATGCGCTCGGCCTCACGGGCCTGATCGTCACGAAGCTCGACGGCACCGCCAAGGGCGG
GATTCTCGCCGCGATCGCGCGGCAGCGCCCGGTGCCCGTCTACTTCATCGGCGTCGGCGAGAAGGTCGAGGACCTGCAGC
CGTTCAGCGCCGTGGAATTCGCGGACGCGCTATTCGACTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (104-166)

• SRP54-type protein, GTPase domain (SRP54) (187-385)

3D structure

• AlphaFold DB: B1YN59

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	52.506	100	0.57