Detailed information    

insolico Bioinformatically predicted

Overview

Name   comQ   Type   Regulator
Locus tag   G4G26_RS16040 Genome accession   NZ_CP049924
Coordinates   3118558..3119427 (-) Length   289 a.a.
NCBI ID   WP_015714626.1    Uniprot ID   C0JBL3
Organism   Bacillus subtilis strain So1b     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 3113558..3124427
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G4G26_RS16005 (G4G26_16060) mrpE 3113729..3114205 (+) 477 WP_029318490.1 Na+/H+ antiporter subunit E -
  G4G26_RS16010 (G4G26_16065) mrpF 3114205..3114489 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  G4G26_RS16015 (G4G26_16070) mnhG 3114473..3114847 (+) 375 WP_003244302.1 monovalent cation/H(+) antiporter subunit G -
  G4G26_RS16020 (G4G26_16075) yuxO 3114888..3115268 (-) 381 WP_017695528.1 hotdog fold thioesterase -
  G4G26_RS16025 (G4G26_16080) comA 3115287..3115931 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  G4G26_RS16030 (G4G26_16085) comP 3116012..3118324 (-) 2313 WP_068947635.1 histidine kinase Regulator
  G4G26_RS16035 (G4G26_16090) comX 3118340..3118561 (-) 222 WP_014114983.1 competence pheromone ComX -
  G4G26_RS16040 (G4G26_16095) comQ 3118558..3119427 (-) 870 WP_015714626.1 polyprenyl synthetase family protein Regulator
  G4G26_RS16045 (G4G26_16100) degQ 3119612..3119752 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  G4G26_RS16050 (G4G26_16105) - 3119974..3120099 (+) 126 WP_141770195.1 hypothetical protein -
  G4G26_RS16055 (G4G26_16110) - 3120214..3120582 (+) 369 WP_014477834.1 hypothetical protein -
  G4G26_RS16060 (G4G26_16115) pdeH 3120558..3121787 (-) 1230 WP_014477835.1 cyclic di-GMP phosphodiesterase -
  G4G26_RS16065 (G4G26_16120) pncB 3121924..3123396 (-) 1473 WP_003228788.1 nicotinate phosphoribosyltransferase -
  G4G26_RS16070 (G4G26_16125) pncA 3123412..3123963 (-) 552 WP_014477836.1 isochorismatase family cysteine hydrolase -

Sequence

Protein


Download         Length: 289 a.a.        Molecular weight: 33019.53 Da        Isoelectric Point: 4.6894

>NTDB_id=375688 G4G26_RS16040 WP_015714626.1 3118558..3119427(-) (comQ) [Bacillus subtilis strain So1b]
MKEIVDENISNEDLKTKLISFIEEKKQFSFAELAYHHYIAFDGKDVTAIELLASGIELLILSADIFDDIEDKDNLQASWM
KIDPSIVINAATTLYTLSLQVISLVSNNPQLLSLTLQYSLQSLQGQHADLNVKISSESEYIEMIKLKSGSLVTLPSVLGV
YLATGEINETVEEYSLYLGIVEQIANDHHGLYYPDNNDIKTRHNLAFYYLKNKYNQSSIDLLNFYAQENNQINNMDELKK
RLQGSGVIQYLNVIKNIALENFKESFKKLRLDEQRKNKLLDQLLRGNIN

Nucleotide


Download         Length: 870 bp        

>NTDB_id=375688 G4G26_RS16040 WP_015714626.1 3118558..3119427(-) (comQ) [Bacillus subtilis strain So1b]
ATGAAGGAGATTGTAGATGAAAATATTTCAAATGAAGACTTAAAAACAAAACTTATTTCTTTTATTGAAGAAAAAAAACA
ATTTTCATTTGCAGAATTAGCTTATCACCATTACATAGCATTTGACGGAAAAGATGTTACAGCAATTGAGTTGTTGGCTT
CTGGTATAGAACTTTTAATTTTATCTGCTGACATTTTTGACGATATTGAGGATAAGGACAATCTTCAGGCTTCTTGGATG
AAAATAGATCCTTCGATAGTGATTAACGCAGCTACTACACTTTATACATTAAGTTTGCAAGTGATAAGTTTAGTTTCAAA
CAATCCGCAACTTCTAAGTCTGACTTTACAATATTCACTTCAATCTTTACAAGGGCAACATGCAGATTTAAATGTAAAAA
TCTCTTCAGAATCAGAGTATATTGAAATGATTAAACTTAAGTCAGGTTCTCTTGTAACATTGCCTAGTGTTCTTGGTGTA
TATTTGGCAACTGGAGAAATTAATGAAACAGTCGAGGAGTATTCACTTTATTTGGGTATAGTCGAGCAAATTGCGAATGA
TCACCATGGGCTATATTATCCTGACAATAATGACATAAAAACTAGACACAATCTTGCCTTCTACTATCTAAAAAATAAAT
ATAACCAATCATCGATTGACTTATTAAATTTTTATGCGCAAGAAAATAATCAGATAAATAACATGGATGAATTGAAAAAG
AGGTTACAAGGATCAGGTGTAATCCAATACCTGAATGTTATTAAAAATATAGCACTGGAAAATTTTAAAGAATCATTCAA
AAAACTGAGATTAGATGAACAAAGAAAGAATAAACTACTTGATCAATTATTAAGGGGGAATATAAATTGA

Domains

Predicted by InterProScan.

Polyprenyl synthetase (polyprenyl_synt)

(45-195)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB C0JBL3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

43.056

99.654

0.429