Detailed information NTG0373351

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: E3226_RS04835
• Genome accession: NZ_CP041713
• Coordinates: 1000661..1001689 (-)
• Length: 342 a.a.
• NCBI ID: WP_028387252.1
• Uniprot ID: -
• Organism: Legionella geestiana strain HL-0438-4026
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 995661..1006689

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
E3226_RS04810 (E3226_004525)	aceA	996072..997370 (+)	1299	WP_202971948.1	isocitrate lyase	-
E3226_RS04815 (E3226_004530)	-	997410..998069 (-)	660	WP_028387248.1	hypothetical protein	-
E3226_RS04820 (E3226_004535)	rpoH	998135..998986 (-)	852	WP_028387249.1	RNA polymerase sigma factor RpoH	-
E3226_RS04825 (E3226_004540)	ftsX	999080..1000012 (-)	933	WP_135842414.1	permease-like cell division protein FtsX	-
E3226_RS04830 (E3226_004545)	ftsE	1000006..1000656 (-)	651	WP_028387251.1	cell division ATP-binding protein FtsE	-
E3226_RS04835 (E3226_004550)	pilA	1000661..1001689 (-)	1029	WP_028387252.1	signal recognition particle-docking protein FtsY	Machinery gene
E3226_RS04840 (E3226_004555)	-	1001749..1003071 (+)	1323	WP_028387253.1	pitrilysin family protein	-
E3226_RS04845 (E3226_004560)	-	1003071..1004378 (+)	1308	WP_135842415.1	pitrilysin family protein	-
E3226_RS04850 (E3226_004565)	rsmD	1004375..1004920 (+)	546	WP_028387255.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
E3226_RS04855 (E3226_004570)	dotD	1005028..1005513 (+)	486	WP_035903748.1	type IVB secretion system lipoprotein DotD	-
E3226_RS04860 (E3226_004575)	-	1005494..1006435 (+)	942	WP_028387257.1	type IV secretion system DotC family protein	-

Sequence

Protein

• Length: 342 a.a.
• Molecular weight: 37207.58 Da
• Isoelectric Point: 6.2462

>NTDB_id=373351 E3226_RS04835 WP_028387252.1 1000661..1001689(-) (pilA) [Legionella geestiana strain HL-0438-4026]
MMKWFKRNTTPEAPTSHEPGTQVALEAPRGIFERFREGLGKTRHQLGERIGRLFLGRKEISPELLEELETLLISADVGID
TATRLTDALRARLARHQLKDSEALFTTLEEDLRAILAPCAQPLEPMTPDASPFVILMVGINGAGKTTTAGKLARHFREQG
KRVMLAAGDTFRAAAVEQLQAWGERNDVAVVAQSTGADSASVVFDAFQSAKARGMDILIADTAGRLHTQGNLMEELRKIR
RVLQKIDPAAPHETMLVLDAGIGQNAVNQAREFHEAVAVSGITMTKLDGTARGGILLAIADTLKIPLRFVGMGEGIDDLR
PFDANAYVRAILGHDDVPEHGE

Nucleotide

• Length: 1029 bp

>NTDB_id=373351 E3226_RS04835 WP_028387252.1 1000661..1001689(-) (pilA) [Legionella geestiana strain HL-0438-4026]
ATGATGAAATGGTTTAAGCGAAACACCACGCCCGAAGCTCCGACCTCACACGAGCCCGGCACGCAGGTTGCCCTAGAAGC
GCCTCGCGGGATTTTTGAACGCTTTCGAGAGGGGCTTGGAAAGACGCGCCACCAGCTTGGGGAGCGCATTGGCCGACTGT
TTCTCGGGCGTAAGGAAATCAGCCCCGAACTTCTTGAAGAGCTGGAGACGCTGCTTATCAGCGCGGATGTCGGCATTGAC
ACTGCTACGCGGCTTACTGATGCGCTGCGGGCACGCCTCGCGCGCCATCAGTTGAAAGATTCAGAGGCACTCTTTACGAC
ACTGGAAGAAGACCTGCGTGCGATTCTTGCCCCCTGTGCCCAGCCGCTCGAACCAATGACTCCCGATGCCAGTCCCTTTG
TGATTCTTATGGTCGGCATTAACGGCGCCGGTAAAACGACTACGGCCGGAAAACTGGCCCGCCACTTTCGCGAGCAGGGC
AAGCGGGTGATGCTGGCTGCAGGTGACACGTTTCGTGCTGCGGCGGTTGAGCAGTTGCAGGCCTGGGGCGAGCGTAACGA
TGTCGCGGTGGTCGCGCAGAGCACCGGTGCTGACAGCGCATCGGTGGTTTTTGATGCTTTTCAGTCAGCAAAAGCTCGCG
GGATGGACATCCTGATAGCTGATACGGCCGGGCGCCTGCACACTCAGGGCAACCTGATGGAGGAATTGCGCAAGATTCGC
CGTGTCCTGCAGAAAATTGACCCGGCGGCACCGCATGAAACGATGCTGGTGCTTGATGCAGGCATTGGCCAGAATGCGGT
TAATCAGGCACGTGAATTTCATGAGGCGGTGGCGGTAAGTGGTATCACCATGACCAAACTCGATGGCACGGCGCGGGGCG
GCATACTTCTCGCCATCGCCGATACCCTGAAAATACCGCTTCGATTTGTGGGCATGGGTGAGGGGATTGACGATCTGCGT
CCCTTTGACGCGAACGCATACGTTCGCGCCATTCTCGGGCATGATGACGTTCCTGAACACGGGGAGTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (46-110)

• SRP54-type protein, GTPase domain (SRP54) (132-333)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	55.333	87.719	0.485