Detailed information    

insolico Bioinformatically predicted

Overview

Name   CJE1441   Type   Regulator
Locus tag   G3T46_RS02440 Genome accession   NZ_CP048763
Coordinates   456217..456837 (-) Length   206 a.a.
NCBI ID   WP_167843380.1    Uniprot ID   -
Organism   Campylobacter jejuni strain ZH006     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context

Location: 451217..461837
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G3T46_RS02395 (G3T46_02395) - 451235..451498 (-) 264 WP_167843447.1 hypothetical protein -
  G3T46_RS02400 (G3T46_02400) - 451479..452174 (-) 696 WP_002783960.1 hypothetical protein -
  G3T46_RS02405 (G3T46_02405) - 452174..452908 (-) 735 WP_032582841.1 hypothetical protein -
  G3T46_RS02410 (G3T46_02410) - 452910..453764 (-) 855 WP_002874354.1 lambda-exonuclease family protein -
  G3T46_RS02415 (G3T46_02415) - 453766..453993 (-) 228 WP_002874355.1 helix-turn-helix domain-containing protein -
  G3T46_RS02420 (G3T46_02420) - 453984..454241 (-) 258 WP_167843379.1 hypothetical protein -
  G3T46_RS02425 (G3T46_02425) - 454232..454501 (-) 270 WP_002874357.1 hypothetical protein -
  G3T46_RS02430 (G3T46_02430) - 455063..455335 (-) 273 WP_002783985.1 hypothetical protein -
  G3T46_RS08785 - 455491..456183 (+) 693 WP_223206741.1 hypothetical protein -
  G3T46_RS02440 (G3T46_02440) CJE1441 456217..456837 (-) 621 WP_167843380.1 DNA/RNA non-specific endonuclease Regulator
  G3T46_RS02445 (G3T46_02445) - 456843..457550 (-) 708 WP_052805202.1 hypothetical protein -
  G3T46_RS02450 (G3T46_02450) - 457543..458331 (-) 789 WP_011049706.1 HipA family kinase -
  G3T46_RS02455 (G3T46_02455) - 458328..459062 (-) 735 WP_044261616.1 S24 family peptidase -
  G3T46_RS02460 (G3T46_02460) - 459174..459392 (+) 219 WP_002826741.1 hypothetical protein -
  G3T46_RS02465 (G3T46_02465) - 459389..459823 (+) 435 WP_002826742.1 hypothetical protein -
  G3T46_RS02470 (G3T46_02470) - 459820..460197 (+) 378 WP_052847754.1 hypothetical protein -
  G3T46_RS02475 (G3T46_02475) - 460194..461195 (+) 1002 WP_167843381.1 hypothetical protein -

Sequence

Protein


Download         Length: 206 a.a.        Molecular weight: 24152.55 Da        Isoelectric Point: 9.7402

>NTDB_id=370443 G3T46_RS02440 WP_167843380.1 456217..456837(-) (CJE1441) [Campylobacter jejuni strain ZH006]
MKKLIILSLLTTLALADYTQYKPSEDFAKYFTKQNCSQVLDKFYYLNCYDYNYKGTKAVAYKLEAENLKGEQIKKRPRFE
DDTNIPKKYRTTWSDYKNSGYDRGHTISNASMRKTTQAQRSTFLMSNITPQNPQINQRVWNKIEKRERQVALKLGEIEVL
NLVNYDSNPINISDTEIIDFEINNNLILKNIAIKNKISGKIDLYNF

Nucleotide


Download         Length: 621 bp        

>NTDB_id=370443 G3T46_RS02440 WP_167843380.1 456217..456837(-) (CJE1441) [Campylobacter jejuni strain ZH006]
ATGAAAAAACTCATAATCTTATCATTATTAACAACTCTAGCATTAGCTGATTATACACAATACAAACCAAGTGAAGATTT
TGCTAAGTATTTTACTAAGCAAAACTGCTCACAAGTTTTAGATAAGTTTTATTATCTAAATTGTTATGATTATAATTATA
AAGGCACTAAAGCTGTAGCTTATAAATTAGAAGCGGAAAATCTAAAAGGCGAACAAATCAAAAAACGCCCACGCTTTGAA
GATGATACAAATATACCTAAAAAATACCGCACTACATGGAGTGATTATAAAAACAGCGGTTATGATAGAGGGCATACTAT
TTCTAATGCTTCAATGAGAAAAACAACCCAAGCTCAAAGAAGCACTTTTTTAATGAGTAATATTACTCCGCAAAATCCAC
AGATCAATCAAAGGGTTTGGAACAAGATTGAAAAAAGAGAAAGACAAGTAGCTTTAAAGCTTGGAGAAATTGAAGTTTTA
AATTTGGTTAATTATGATAGCAACCCTATTAATATTAGTGATACAGAAATTATAGACTTTGAAATTAATAATAATTTGAT
ATTAAAAAATATAGCTATTAAAAATAAAATATCAGGCAAAATAGATTTATATAATTTTTAA

Domains

Predicted by InterProScan.

DNA/RNA non-specific endonuclease (Endonuclease_NS)

(27-168)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  CJE1441 Campylobacter jejuni RM1221

92.442

83.495

0.772
  CJE0566 Campylobacter jejuni RM1221

90.698

83.495

0.757