Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   FHE73_RS20860 Genome accession   NZ_CP040782
Coordinates   4059379..4059837 (+) Length   152 a.a.
NCBI ID   WP_000804864.1    Uniprot ID   -
Organism   Bacillus thuringiensis strain HM-311     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 4054379..4064837
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FHE73_RS20845 (FHE73_20845) - 4055049..4055285 (+) 237 WP_089148310.1 hypothetical protein -
  FHE73_RS20850 (FHE73_20850) - 4055446..4057554 (-) 2109 WP_000423549.1 polyphosphate kinase -
  FHE73_RS20855 (FHE73_20855) ppx 4057663..4059237 (-) 1575 WP_061884526.1 exopolyphosphatase -
  FHE73_RS20860 (FHE73_20860) kre 4059379..4059837 (+) 459 WP_000804864.1 YkyB family protein Regulator
  FHE73_RS20865 (FHE73_20865) - 4059869..4060531 (-) 663 WP_000922485.1 YkyA family protein -
  FHE73_RS20870 (FHE73_20870) - 4061145..4061798 (-) 654 WP_000680819.1 diguanylate cyclase -
  FHE73_RS20875 (FHE73_20875) - 4061962..4062195 (+) 234 WP_000939449.1 SPP1 phage holin family protein -
  FHE73_RS20880 (FHE73_20880) - 4062227..4062727 (-) 501 WP_000708124.1 hypothetical protein -
  FHE73_RS20885 (FHE73_20885) - 4063130..4064671 (+) 1542 WP_000449907.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 152 a.a.        Molecular weight: 17757.49 Da        Isoelectric Point: 10.6793

>NTDB_id=367139 FHE73_RS20860 WP_000804864.1 4059379..4059837(+) (kre) [Bacillus thuringiensis strain HM-311]
MKPSQPQSQLQNQHSINRLAQSIFVVNRHAKAATNPKYLYWLKKTALERLIAEKKAIKEGLHFSRNPRFSQQQSDVLIRL
GDYFFHIPPTKEDFRILPHLGHLESSYRNPKTTLSLTVAKKTLQDYIGPEALKQEKKLSEPVPWYSRTYTKK

Nucleotide


Download         Length: 459 bp        

>NTDB_id=367139 FHE73_RS20860 WP_000804864.1 4059379..4059837(+) (kre) [Bacillus thuringiensis strain HM-311]
ATGAAACCTTCACAACCACAATCTCAATTACAAAATCAACATTCTATTAATCGACTAGCTCAATCTATTTTCGTTGTGAA
TCGTCATGCTAAAGCAGCTACTAATCCTAAATATTTATACTGGTTAAAAAAGACAGCTTTAGAACGTTTGATTGCTGAAA
AAAAAGCAATTAAAGAAGGATTACATTTTTCTAGAAACCCACGTTTTAGCCAACAACAATCTGATGTCCTTATACGTTTA
GGCGATTATTTTTTCCACATCCCTCCTACGAAAGAAGATTTTCGAATTCTACCGCATCTTGGTCATCTTGAATCCTCCTA
TCGAAATCCGAAAACAACCTTATCATTAACAGTAGCAAAAAAAACACTTCAAGATTATATTGGTCCTGAAGCATTAAAAC
AAGAAAAAAAATTAAGTGAACCTGTTCCATGGTATAGTCGTACTTATACAAAAAAATAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

64.655

76.316

0.493

Multiple sequence alignment