Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | FD746_RS06030 | Genome accession | NZ_CP040232 |
| Coordinates | 1185094..1185564 (+) | Length | 156 a.a. |
| NCBI ID | WP_000934769.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain GD1706 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1180094..1190564
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FD746_RS05990 (FD746_06020) | - | 1180110..1180430 (+) | 321 | WP_001120197.1 | DUF771 domain-containing protein | - |
| FD746_RS05995 (FD746_06025) | - | 1180427..1180588 (+) | 162 | WP_000066020.1 | DUF1270 domain-containing protein | - |
| FD746_RS06000 (FD746_06030) | - | 1180681..1180984 (+) | 304 | Protein_1160 | DUF2482 family protein | - |
| FD746_RS06005 (FD746_06035) | - | 1180989..1181249 (+) | 261 | WP_000291506.1 | DUF1108 family protein | - |
| FD746_RS06010 (FD746_06040) | - | 1181258..1181521 (+) | 264 | WP_001205732.1 | hypothetical protein | - |
| FD746_RS06015 (FD746_06045) | - | 1181530..1183473 (+) | 1944 | WP_000700570.1 | AAA family ATPase | - |
| FD746_RS06020 (FD746_06050) | - | 1183475..1184395 (+) | 921 | WP_000138473.1 | recombinase RecT | - |
| FD746_RS06025 (FD746_06055) | - | 1184476..1185093 (+) | 618 | WP_071621397.1 | MBL fold metallo-hydrolase | - |
| FD746_RS06030 (FD746_06060) | ssbA | 1185094..1185564 (+) | 471 | WP_000934769.1 | single-stranded DNA-binding protein | Machinery gene |
| FD746_RS06035 (FD746_06065) | - | 1185594..1186487 (+) | 894 | WP_031901047.1 | DnaD domain protein | - |
| FD746_RS06040 (FD746_06070) | - | 1186494..1186712 (+) | 219 | WP_000338530.1 | hypothetical protein | - |
| FD746_RS14695 | - | 1186721..1186813 (+) | 93 | Protein_1169 | RusA family crossover junction endodeoxyribonuclease | - |
| FD746_RS06045 (FD746_06075) | - | 1186857..1187393 (+) | 537 | WP_000185669.1 | dUTP diphosphatase | - |
| FD746_RS06050 (FD746_06080) | - | 1187430..1187675 (+) | 246 | WP_001282074.1 | hypothetical protein | - |
| FD746_RS06055 (FD746_06085) | - | 1187672..1187878 (+) | 207 | WP_149888490.1 | DUF1381 domain-containing protein | - |
| FD746_RS06060 (FD746_06090) | rinB | 1187875..1188024 (+) | 150 | WP_031761843.1 | transcriptional activator RinB | - |
| FD746_RS06065 (FD746_06095) | - | 1188183..1188833 (+) | 651 | WP_001005262.1 | hypothetical protein | - |
| FD746_RS06070 (FD746_06100) | - | 1188833..1189033 (+) | 201 | WP_000265043.1 | DUF1514 family protein | - |
| FD746_RS06075 (FD746_06105) | - | 1189061..1189477 (+) | 417 | WP_000590122.1 | hypothetical protein | - |
| FD746_RS06080 (FD746_06110) | - | 1189709..1190008 (+) | 300 | WP_000988330.1 | HNH endonuclease | - |
| FD746_RS06085 (FD746_06115) | - | 1190138..1190482 (+) | 345 | WP_000402904.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 156 a.a. Molecular weight: 17671.55 Da Isoelectric Point: 5.2672
>NTDB_id=362697 FD746_RS06030 WP_000934769.1 1185094..1185564(+) (ssbA) [Staphylococcus aureus strain GD1706]
MLNRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLTGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIEIDDNDLPF
MLNRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLTGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIEIDDNDLPF
Nucleotide
Download Length: 471 bp
>NTDB_id=362697 FD746_RS06030 WP_000934769.1 1185094..1185564(+) (ssbA) [Staphylococcus aureus strain GD1706]
ATGCTAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGAACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGTACATTTACAAATGCACAAGGCGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGACGGGCGTAGATGGTAGGTTACAAACGCGG
AATTATGAAAATAAGGAAGGTCAACGTGTATATGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATACCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAAATAGATGACAATGATTTACCATTCTAA
ATGCTAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGAACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGTACATTTACAAATGCACAAGGCGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGACGGGCGTAGATGGTAGGTTACAAACGCGG
AATTATGAAAATAAGGAAGGTCAACGTGTATATGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATACCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAAATAGATGACAATGATTTACCATTCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
55.367 |
100 |
0.628 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
50.588 |
100 |
0.551 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
59.434 |
67.949 |
0.404 |
| ssb | Glaesserella parasuis strain SC1401 |
32.203 |
100 |
0.365 |