Detailed information NTG0354849

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: E4664_RS08340
• Genome accession: NZ_CP038500
• Coordinates: 1690423..1691124 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594588.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain CIAT758
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1685423..1696124

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
E4664_RS08310 (E4664_08310)	-	1685730..1686173 (-)	444	WP_001246675.1	SRPBCC family protein	-
E4664_RS08315 (E4664_08315)	tadA	1686243..1686746 (-)	504	WP_000033177.1	tRNA adenosine(34) deaminase TadA	-
E4664_RS08320 (E4664_08320)	-	1686753..1687877 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
E4664_RS08325 (E4664_08325)	ung	1687874..1688587 (-)	714	WP_001177527.1	uracil-DNA glycosylase	-
E4664_RS08330 (E4664_08330)	-	1688638..1689234 (-)	597	WP_000908453.1	6-pyruvoyl trahydropterin synthase family protein	-
E4664_RS08335 (E4664_08335)	gspK	1689464..1690423 (-)	960	WP_001218621.1	type II secretion system minor pseudopilin GspK	-
E4664_RS08340 (E4664_08340)	xcpW	1690423..1691124 (-)	702	WP_000594588.1	type II secretion system minor pseudopilin GspJ	Machinery gene
E4664_RS08345 (E4664_08345)	xcpV	1691124..1691504 (-)	381	WP_000836909.1	type II secretion system minor pseudopilin GspI	Machinery gene
E4664_RS08350 (E4664_08350)	-	1691494..1692048 (-)	555	WP_000841372.1	type II secretion system protein	-
E4664_RS08355 (E4664_08355)	-	1692058..1692666 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
E4664_RS08360 (E4664_08360)	-	1692704..1693477 (-)	774	WP_000497301.1	TatD family hydrolase	-
E4664_RS08365 (E4664_08365)	-	1693495..1693836 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
E4664_RS08370 (E4664_08370)	-	1693848..1694828 (-)	981	WP_001075419.1	DNA polymerase III subunit delta'	-
E4664_RS08375 (E4664_08375)	kdsB	1694840..1695601 (-)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26625.55 Da
• Isoelectric Point: 9.3468

>NTDB_id=354849 E4664_RS08340 WP_000594588.1 1690423..1691124(-) (xcpW) [Acinetobacter baumannii strain CIAT758]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQDGNS

Nucleotide

• Length: 702 bp

>NTDB_id=354849 E4664_RS08340 WP_000594588.1 1690423..1691124(-) (xcpW) [Acinetobacter baumannii strain CIAT758]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGATCAAAAAAAACTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATACCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCACAGGACGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.142	100	0.991