Detailed information NTG0352937

Bioinformatically predicted

Overview

• Name: rexA
• Type: Machinery gene
• Locus tag: GOM46_RS04410
• Genome accession: NZ_CP046525
• Coordinates: 883049..886699 (-)
• Length: 1216 a.a.
• NCBI ID: WP_235083283.1
• Uniprot ID: -
• Organism: Streptococcus infantis strain SO
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 878049..891699

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GOM46_RS04390 (GOM46_04380)	-	878309..879220 (-)	912	WP_235083282.1	phosphodiester glycosidase family protein	-
GOM46_RS04395 (GOM46_04385)	-	879217..880260 (-)	1044	Protein_851	glycosyltransferase	-
GOM46_RS04400 (GOM46_04390)	-	880500..882266 (-)	1767	WP_006150699.1	LPXTG cell wall anchor domain-containing protein	-
GOM46_RS04405 (GOM46_04395)	-	882464..882961 (-)	498	WP_006150658.1	YkgJ family cysteine cluster protein	-
GOM46_RS04410 (GOM46_04400)	rexA	883049..886699 (-)	3651	WP_235083283.1	helicase-exonuclease AddAB subunit AddA	Machinery gene
GOM46_RS04415 (GOM46_04405)	rexB	886696..889947 (-)	3252	WP_006150682.1	ATP-dependent nuclease subunit B	Machinery gene
GOM46_RS04420 (GOM46_04410)	-	890078..890749 (-)	672	WP_006150664.1	CPBP family intramembrane glutamic endopeptidase	-

Sequence

Protein

• Length: 1216 a.a.
• Molecular weight: 140920.70 Da
• Isoelectric Point: 5.2373

>NTDB_id=352937 GOM46_RS04410 WP_235083283.1 883049..886699(-) (rexA) [Streptococcus infantis strain SO]
MKFLSQEEIKELQIAEAQSNKKPKKTAEQIQAIYSSGQNILVSASAGSGKTFVMAERILDQLARGVEIRQLFISTFTVKA
ATELKERLEKKISQQIQETQDVELKKHLGRQLADLPNAAIGTMDSFTQKFLAKHGYLLDLAPNFRILQNESEQLLLKNEV
FRQVFESHYQGKEQEQFSRLVKNFAGRSKDARGLRKQVYMIYDFLQSTSNPQTWLQDSFLKGCENADFTIAKEKLVDDIK
EKLWDLETFFRYHLDNVANEFGKAAYLESVQQVLNEIGSLTHESTFEQYQEVLERVVNISKAKNGKALTNASRKAELQDL
KEAYNQERKSKFEKLIALNDQITLLKFQEDYHQESWDLAKTFQVFMRDFVDAYRQRKREENAFEFADISHYTIEILENFP
QVRQEYQERFHEVMVDEYQDTNHIQERMLELLSNGHNRFMVGDIKQSIYRFRQADPQIFNEKFHRFAQDDKEGQLILLKE
NFRSGSEVLDATNDVFKHLMDEEVGEISYDGMHQLVFGNTDIQSNPENKAEVLLYDKDDDSDSDDEEEFATNKLTGEMRM
VLKEIIHLHNDKGVPFKDMVILTASRSRNDQVLLALSEYGIPVKTDGAQANYLQSLEVQVMLDTLRVIHNPLQDFALVAL
MKSPMFSFDEDELARLALQKSEDKVQENFYEKLVNAQAKTSLHKDLIKSELHKKLEFFMETVHSWRFYSKTHSLYDLIWK
IYSDRFYYDYVGALPNGQARQANLYALALRADQFEKSNYKGLSRFIRMIDQVLEAQHDLANVAVAPPKDAVELMSIHKSK
GLEFPYVFILNIDQKFNKKDTMSEVILSRTNGIGLNYVARVATNAKEEYVPSTIKLSIPSLTYTQNEEELQLASYSELMR
LLYVAMTRAEKKLYLVGKGSREKLESKEYPTNGKGLLSREIRLDAQNFQDWIWAIYQAFSKEDLHFSVRFEGEEDLTKEA
IGELEHKSQLQNLSQAENRQSEAIKDALEMLKEVEVYNEIHRAAINLPSVQTPSQIKKFYEPVMDMEGVVVAGQSKPKET
TVQFELPDFSKTEKVTGAEIGSATHELMQRINLNKKPTLKTLSEALDQVQASPAVKEKVNLEKILSFFDTILGQEILANQ
DKLYREQPFSMLKRDAKSQEDFVVRGILDGYLLYNDKIVLFDYKTDRYEFSSQLIERYRGQLELYAEALSRSYQIDRIEK
HLILLGKDTVEVVEVN

Nucleotide

• Length: 3651 bp

>NTDB_id=352937 GOM46_RS04410 WP_235083283.1 883049..886699(-) (rexA) [Streptococcus infantis strain SO]
ATGAAATTTTTATCTCAAGAAGAGATTAAAGAGTTACAAATAGCAGAAGCTCAGTCTAACAAGAAACCTAAGAAAACAGC
TGAACAAATTCAAGCAATCTATAGTTCTGGTCAAAATATTCTAGTCTCAGCTTCTGCTGGTTCGGGGAAAACCTTTGTCA
TGGCTGAACGTATTCTTGACCAACTAGCGCGTGGTGTAGAAATTCGCCAACTCTTTATCTCTACCTTTACCGTTAAGGCA
GCAACTGAGTTAAAAGAACGCTTGGAAAAGAAAATCAGCCAACAGATCCAAGAAACGCAAGATGTGGAACTAAAAAAACA
TCTTGGTAGACAACTAGCCGATTTACCCAATGCTGCAATTGGGACCATGGATTCTTTTACCCAGAAGTTCCTGGCTAAGC
ACGGCTACCTCCTTGATCTTGCTCCAAACTTTCGTATCCTTCAGAACGAAAGTGAACAACTTCTCCTAAAAAATGAGGTT
TTTCGACAAGTTTTTGAAAGTCATTACCAAGGCAAAGAACAAGAACAATTTAGTCGATTAGTCAAAAACTTTGCAGGTAG
GAGCAAAGATGCGCGTGGACTGCGTAAACAGGTCTATATGATTTATGATTTTTTGCAATCTACTAGCAATCCTCAGACCT
GGCTACAGGATTCTTTCCTAAAAGGTTGTGAAAATGCTGATTTTACTATAGCTAAAGAAAAACTTGTAGACGATATAAAG
GAGAAACTCTGGGATTTAGAAACCTTTTTCCGTTACCACCTGGATAATGTTGCCAATGAATTCGGTAAAGCAGCTTATTT
AGAATCTGTCCAACAAGTTCTTAATGAAATCGGTTCTTTAACTCATGAATCTACTTTTGAACAATACCAAGAAGTTTTAG
AGCGAGTTGTAAATATTTCTAAAGCTAAGAATGGTAAAGCTCTCACAAACGCCAGTCGCAAGGCCGAACTGCAAGACTTG
AAAGAAGCTTACAACCAAGAGAGAAAATCAAAATTTGAAAAGCTGATTGCACTCAATGATCAAATCACTTTACTAAAATT
CCAAGAAGATTATCATCAAGAGTCCTGGGACTTGGCAAAGACTTTCCAAGTCTTCATGAGAGATTTTGTTGATGCTTATC
GACAACGAAAACGCGAAGAAAATGCCTTCGAATTTGCTGATATTAGCCACTATACCATTGAGATTTTGGAAAACTTCCCT
CAGGTTCGACAAGAGTATCAGGAACGCTTCCATGAAGTCATGGTCGATGAATATCAGGATACCAATCACATCCAGGAAAG
AATGCTAGAACTCCTCTCAAACGGTCATAATCGTTTTATGGTGGGTGACATTAAGCAGTCTATTTATCGTTTTAGACAGG
CAGATCCCCAAATTTTCAACGAAAAATTTCATAGATTTGCTCAAGATGACAAAGAAGGTCAGTTAATTCTACTTAAGGAA
AACTTCCGGAGCGGTTCAGAGGTTCTTGATGCTACGAACGATGTCTTTAAACACCTCATGGACGAGGAAGTTGGAGAGAT
ATCTTATGACGGTATGCACCAGCTTGTTTTTGGAAATACTGATATTCAATCAAATCCAGAAAACAAGGCAGAAGTTCTCT
TGTACGATAAGGATGATGATAGCGATTCTGATGATGAGGAGGAATTTGCAACTAATAAACTGACTGGTGAAATGCGAATG
GTGCTCAAGGAGATAATTCACCTTCATAATGATAAAGGTGTACCTTTCAAGGACATGGTTATCTTAACTGCTAGTCGAAG
TCGTAATGATCAAGTTCTGCTCGCCTTGTCTGAATATGGTATTCCTGTCAAGACAGACGGTGCTCAAGCAAACTATTTGC
AATCCCTAGAAGTCCAGGTTATGTTGGATACTCTTCGTGTCATCCACAACCCTCTTCAAGACTTTGCTTTGGTTGCTCTA
ATGAAATCTCCTATGTTTAGCTTTGATGAGGATGAATTGGCTCGTCTCGCTCTCCAAAAATCTGAGGATAAAGTTCAAGA
GAACTTTTATGAGAAACTAGTCAATGCTCAAGCGAAAACTAGTCTTCATAAGGATTTAATTAAGTCTGAACTTCATAAAA
AATTAGAATTTTTCATGGAAACAGTCCATTCATGGCGCTTTTATTCTAAAACACATTCTCTTTATGATCTCATTTGGAAA
ATCTATAGCGACCGCTTTTACTATGACTATGTTGGTGCCTTGCCAAATGGACAGGCCAGACAGGCAAATCTCTACGCCCT
TGCTCTAAGAGCGGATCAGTTTGAAAAGAGTAATTACAAGGGATTATCCCGATTTATTCGAATGATTGACCAAGTCTTGG
AAGCCCAGCATGATCTTGCCAATGTTGCTGTAGCACCACCTAAGGATGCAGTAGAACTTATGAGTATTCATAAGAGTAAA
GGGCTTGAATTTCCTTATGTCTTTATCCTCAATATTGATCAAAAATTCAACAAGAAGGATACTATGTCTGAGGTTATCCT
CAGTCGCACAAATGGAATTGGATTAAATTATGTAGCTAGAGTCGCTACAAATGCAAAAGAGGAATATGTTCCATCTACCA
TTAAATTATCTATCCCAAGCTTAACATATACGCAAAATGAGGAAGAACTCCAATTAGCAAGTTATTCTGAACTCATGCGT
TTGCTCTATGTAGCCATGACACGTGCTGAGAAAAAACTCTATCTAGTTGGAAAAGGATCACGTGAAAAATTAGAGTCTAA
AGAATATCCGACAAATGGAAAAGGTCTTTTGAGTCGAGAAATTAGACTAGACGCTCAAAATTTCCAGGATTGGATTTGGG
CCATCTATCAAGCATTTTCTAAAGAGGATTTGCACTTTAGTGTGCGCTTTGAAGGTGAAGAAGACCTAACCAAAGAAGCT
ATCGGAGAATTGGAACATAAAAGTCAACTTCAAAACCTATCCCAAGCAGAAAACCGTCAGTCAGAAGCCATCAAAGATGC
GTTGGAAATGCTAAAAGAAGTGGAAGTGTATAACGAGATCCACCGTGCAGCAATTAATCTTCCAAGTGTTCAGACACCGA
GTCAGATTAAAAAGTTCTATGAACCGGTCATGGATATGGAAGGAGTTGTAGTAGCTGGTCAAAGTAAACCAAAAGAGACT
ACTGTTCAGTTTGAGCTTCCAGATTTTTCAAAAACTGAAAAAGTTACAGGGGCTGAGATTGGTAGTGCGACCCATGAATT
GATGCAACGAATTAACCTCAATAAGAAGCCTACTTTGAAAACTCTATCAGAAGCCTTAGATCAAGTGCAAGCAAGTCCTG
CCGTTAAGGAGAAAGTCAATCTAGAAAAAATCCTATCCTTCTTTGATACAATTCTTGGTCAAGAGATTCTTGCTAATCAA
GATAAACTATACCGAGAACAACCCTTCTCTATGTTAAAAAGAGATGCTAAGAGTCAGGAAGACTTTGTTGTCCGTGGTAT
TTTAGATGGTTATTTGCTTTATAATGATAAGATTGTTCTATTTGACTATAAGACCGATCGATACGAGTTTTCAAGTCAAC
TTATTGAACGTTATCGTGGTCAATTAGAATTATATGCTGAGGCTCTATCTCGTTCTTATCAGATAGATAGAATTGAGAAA
CACCTAATTTTACTTGGCAAAGATACTGTAGAAGTAGTCGAGGTTAACTAA

Domains

Predicted by InterProScan.

• PD-(D/E)XK nuclease superfamily (PDDEXK_1) (1052-1192)

• UvrD-like helicase C-terminal domain (UvrD_C) (476-895)

• UvrD/REP helicase N-terminal domain (UvrD-helicase) (26-466)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rexA	Streptococcus pneumoniae R6	76.955	99.918	0.769