Detailed information    

insolico Bioinformatically predicted

Overview


Name   rcrP   Type   Regulator
Locus tag   ES276_RS01960 Genome accession   NZ_CP038252
Coordinates   364323..365144 (+) Length   273 a.a.
NCBI ID   WP_000601684.1    Uniprot ID   A0A4M9J287
Organism   Streptococcus pneumoniae strain TVO_1901936     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context


Location: 359323..370144
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ES276_RS01935 (ES276_02055) - 359677..360285 (+) 609 WP_000083614.1 hypothetical protein -
  ES276_RS01940 (ES276_02060) - 360278..360688 (+) 411 WP_000595758.1 hypothetical protein -
  ES276_RS01945 (ES276_02065) ply 360699..362114 (+) 1416 WP_001284361.1 cholesterol-dependent cytolysin pneumolysin -
  ES276_RS01950 (ES276_02075) - 362995..363711 (+) 717 WP_000532876.1 YebC/PmpR family DNA-binding transcriptional regulator -
  ES276_RS01955 (ES276_02085) - 363835..364306 (+) 472 Protein_376 MarR family winged helix-turn-helix transcriptional regulator -
  ES276_RS01960 (ES276_02090) rcrP 364323..365144 (+) 822 WP_000601684.1 ABC transporter permease Regulator
  ES276_RS01965 (ES276_02095) rcrQ 365199..366182 (+) 984 WP_223715127.1 ABC transporter ATP-binding protein/permease Regulator
  ES276_RS01970 (ES276_02100) - 366248..366610 (+) 363 WP_000078805.1 DUF2200 domain-containing protein -
  ES276_RS01975 (ES276_02105) - 366607..367110 (+) 504 WP_000800931.1 phosphatase PAP2 family protein -
  ES276_RS01980 (ES276_02110) - 367224..367670 (+) 447 WP_000776589.1 LytTR family DNA-binding domain-containing protein -
  ES276_RS01985 (ES276_02115) - 367676..368350 (+) 675 WP_000725749.1 LiaF transmembrane domain-containing protein -
  ES276_RS01990 (ES276_02120) - 368511..368702 (+) 192 WP_000291826.1 cell wall-binding protein -
  ES276_RS01995 - 368727..368789 (+) 63 WP_219335539.1 hypothetical protein -
  ES276_RS10820 - 368814..368945 (-) 132 WP_001811306.1 hypothetical protein -
  ES276_RS02000 (ES276_02125) - 369039..369338 (+) 300 WP_001013974.1 DUF4651 domain-containing protein -
  ES276_RS02005 (ES276_02130) - 369335..369652 (+) 318 WP_000615765.1 thioredoxin family protein -

Sequence


Protein


Download         Length: 273 a.a.        Molecular weight: 30566.08 Da        Isoelectric Point: 5.9310

>NTDB_id=352608 ES276_RS01960 WP_000601684.1 364323..365144(+) (rcrP) [Streptococcus pneumoniae strain TVO_1901936]
MILLAILFTCFSVYLELEVPTYISKITDLLGSQETNLDELWQSASMMMGMSFLAFLSVVAVGFFASRVAASYTSRLRSDI
FNRVLDYSQTEIKKFSIPSLLTRTTNDITQVQMLITMGLQVVTRGSIMAIWAIGKILGHSEYWLWAVLVAVIINVLMTTV
LMTLAFPKQSLIQGLTDKLNSITRESLTGIRVVRAYNAEDYQNEKFAAVNDELTRLNLFVNRLMAILNPIMMGISSGLSV
AIYWIGAYVINDAAPIARLPLFSDMIVFMSYAM

Nucleotide


Download         Length: 822 bp        

>NTDB_id=352608 ES276_RS01960 WP_000601684.1 364323..365144(+) (rcrP) [Streptococcus pneumoniae strain TVO_1901936]
ATGATTTTACTAGCCATTCTCTTTACTTGCTTTTCGGTCTATCTAGAGTTGGAAGTGCCGACCTATATCTCGAAAATTAC
GGATTTGCTAGGTAGTCAAGAAACTAATTTAGATGAGTTGTGGCAGTCGGCAAGCATGATGATGGGAATGTCCTTTCTTG
CCTTCTTGTCCGTAGTTGCAGTTGGATTTTTTGCATCCCGAGTGGCGGCTTCTTATACTAGTAGGCTGAGAAGTGATATT
TTTAACCGAGTTTTGGATTACTCGCAGACAGAGATTAAGAAATTTTCAATTCCTAGCCTCTTGACGCGTACTACCAATGA
CATTACTCAAGTTCAAATGTTGATTACTATGGGCTTGCAAGTGGTAACGCGTGGTTCAATTATGGCTATCTGGGCTATTG
GGAAGATTTTAGGTCATTCAGAATACTGGCTCTGGGCCGTACTTGTGGCAGTGATTATCAACGTCCTGATGACGACCGTT
TTGATGACGCTAGCCTTTCCAAAACAGTCCTTGATTCAGGGGCTGACAGATAAACTGAACAGTATCACTCGTGAGAGTTT
AACAGGTATTCGTGTCGTTCGTGCCTACAATGCAGAGGATTATCAAAATGAAAAATTTGCAGCAGTAAATGATGAATTGA
CCCGTTTGAATTTGTTTGTCAACCGTCTTATGGCTATTTTGAATCCTATCATGATGGGGATTTCAAGTGGTTTGAGTGTG
GCGATTTACTGGATTGGGGCCTATGTGATTAACGACGCTGCTCCGATAGCGCGTCTGCCTCTCTTTAGTGACATGATTGT
TTTCATGTCTTATGCCATGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A4M9J287

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

57.544

100

0.601


Multiple sequence alignment