Detailed information NTG0348703

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: EYC12_RS05375
• Genome accession: NZ_CP036396
• Coordinates: 1126296..1127096 (-)
• Length: 266 a.a.
• NCBI ID: WP_000841124.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain 12C8
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1121296..1132096

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EYC12_RS05335	-	1122064..1122849 (-)	786	WP_000488071.1	hypothetical protein	-
EYC12_RS05340	-	1122849..1123235 (-)	387	WP_000397472.1	DUF1294 domain-containing protein	-
EYC12_RS07570	-	1123238..1123435 (+)	198	WP_001116510.1	hypothetical protein	-
EYC12_RS05345	-	1123574..1123840 (-)	267	WP_001987464.1	hypothetical protein	-
EYC12_RS05350	-	1123924..1124262 (-)	339	WP_033587433.1	glycoside hydrolase family protein	-
EYC12_RS05355	-	1124273..1124833 (-)	561	WP_000037133.1	hypothetical protein	-
EYC12_RS05360	-	1124817..1125155 (-)	339	WP_000699920.1	hypothetical protein	-
EYC12_RS05365	-	1125286..1125837 (-)	552	WP_000892207.1	tetratricopeptide repeat protein	-
EYC12_RS05370	dprB	1125895..1126299 (-)	405	WP_000599206.1	Holliday junction resolvase RuvX	Machinery gene
EYC12_RS05375	dprA	1126296..1127096 (-)	801	WP_000841124.1	DNA-processing protein DprA	Machinery gene
EYC12_RS05380	minE	1127103..1127336 (-)	234	WP_000051414.1	cell division topological specificity factor MinE	-
EYC12_RS05385	minD	1127333..1128139 (-)	807	WP_001019032.1	septum site-determining protein MinD	-
EYC12_RS05390	ilvC	1128163..1129155 (-)	993	WP_001207741.1	ketol-acid reductoisomerase	-
EYC12_RS05400	-	1129404..1130186 (+)	783	WP_001168309.1	NAD+ synthase	-
EYC12_RS05405	-	1130183..1131121 (+)	939	WP_000833970.1	tetraacyldisaccharide 4'-kinase	-
EYC12_RS05410	pseH	1131054..1131596 (-)	543	WP_000742683.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29867.80 Da
• Isoelectric Point: 8.2191

>NTDB_id=348703 EYC12_RS05375 WP_000841124.1 1126296..1127096(-) (dprA) [Helicobacter pylori strain 12C8]
MKSNFQYSALENIPKVFDILKDPPKKLYCVGDTKLLEVPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPTTIMLSPCSLDFIYPTNNHKVIQEIAQNGLILSEYEKDFMPVKGSFLARNRLVIALSDAVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDYHLKEMPEIKDEFLEYCAKNPSYEEVY
LKFGDKLLEYELLGKIKRINHIVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=348703 EYC12_RS05375 WP_000841124.1 1126296..1127096(-) (dprA) [Helicobacter pylori strain 12C8]
ATGAAAAGTAATTTCCAATACAGCGCGCTAGAAAATATCCCTAAAGTCTTTGACATTCTCAAAGACCCCCCTAAAAAACT
CTATTGTGTGGGCGATACCAAGCTTTTAGAAGTGCCTTTAAAAGTGGCTATCATCGGCACAAGAAGACCCACCCCTTATA
GCAAGCAACACACCATCACTCTAGCCAGAGAGCTTGCTAAAAATGGTGCGGTTATTGTGAGCGGAGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTGCCAACAACGATCATGCTTTCGCCTTGCAGTTTGGATTTCATCTATCCTACGAA
TAACCATAAAGTGATCCAAGAAATCGCGCAAAACGGCTTGATTTTAAGCGAATATGAAAAGGATTTCATGCCCGTTAAAG
GCTCTTTTTTAGCGAGAAACCGCCTGGTGATCGCTTTAAGCGATGCGGTCATTATCCCCCAAGCGGATTTGAAAAGCGGC
TCTATGAGCAGCGCGAGATTAGCCCAAAAATACCAAAAACCCTTGTTTGTTTTACCCCAACGCCTGAACGAGAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGACT
ACCATTTAAAAGAAATGCCTGAAATCAAAGACGAATTTTTAGAATATTGCGCCAAAAACCCGAGCTATGAAGAGGTGTAT
CTCAAATTTGGGGACAAGCTTTTAGAATACGAGCTGTTGGGTAAGATTAAACGCATCAATCATATCGTGGTGTTAGCGTG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (12-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	95.865	100	0.959
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	49.074	81.203	0.398