Detailed information
Bioinformatically predicted
Overview
| Name | pilJ | Type | Machinery gene |
| Locus tag | GIJ09_RS07010 | Genome accession | NZ_CP045832 |
| Coordinates | 1284936..1285868 (-) | Length | 310 a.a. |
| NCBI ID | WP_153707871.1 | Uniprot ID | - |
| Organism | Neisseria gonorrhoeae strain AUSMDU00010541 | ||
| Function | type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1279936..1290868
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GIJ09_RS06975 (GIJ09_06975) | yaaA | 1279968..1280747 (-) | 780 | WP_003706583.1 | peroxide stress protein YaaA | - |
| GIJ09_RS06980 (GIJ09_06980) | dapC | 1280903..1282090 (-) | 1188 | WP_149032485.1 | succinyldiaminopimelate transaminase | - |
| GIJ09_RS06985 (GIJ09_06985) | dut | 1282168..1282620 (-) | 453 | WP_010359930.1 | dUTP diphosphatase | - |
| GIJ09_RS06990 (GIJ09_06990) | - | 1282786..1283496 (+) | 711 | Protein_1302 | AzlC family ABC transporter permease | - |
| GIJ09_RS06995 (GIJ09_06995) | - | 1283493..1283801 (+) | 309 | WP_010359926.1 | AzlD family protein | - |
| GIJ09_RS07000 (GIJ09_07000) | pilL | 1283871..1284344 (-) | 474 | WP_025455985.1 | PilX family type IV pilin | Machinery gene |
| GIJ09_RS07005 (GIJ09_07005) | pilK | 1284346..1284957 (-) | 612 | WP_010359922.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
| GIJ09_RS07010 (GIJ09_07010) | pilJ | 1284936..1285868 (-) | 933 | WP_153707871.1 | PilW family protein | Machinery gene |
| GIJ09_RS07015 (GIJ09_07015) | pilV | 1285865..1286476 (-) | 612 | WP_050164991.1 | type IV pilus modification protein PilV | Regulator |
| GIJ09_RS07020 (GIJ09_07020) | pilH | 1286508..1287173 (-) | 666 | WP_047918678.1 | Tfp pilus assembly protein FimT/FimU | Machinery gene |
| GIJ09_RS07025 (GIJ09_07025) | dnaB | 1287481..1288887 (-) | 1407 | WP_050164993.1 | replicative DNA helicase | - |
| GIJ09_RS07030 (GIJ09_07030) | - | 1289051..1289632 (+) | 582 | WP_003690895.1 | superoxide dismutase | - |
| GIJ09_RS07035 (GIJ09_07035) | - | 1289864..1290373 (-) | 510 | WP_003687909.1 | isoprenylcysteine carboxyl methyltransferase family protein | - |
Sequence
Protein
Download Length: 310 a.a. Molecular weight: 34099.98 Da Isoelectric Point: 9.1776
>NTDB_id=348226 GIJ09_RS07010 WP_153707871.1 1284936..1285868(-) (pilJ) [Neisseria gonorrhoeae strain AUSMDU00010541]
MKRKMLNVPKGGYDGMKGFTIVEFLVAGLLSIIVLIAVVSSYFTSRKLNDVANERLAEQQDLRNAATLIVRDARMAGSFG
CFNMSEHIKDVVVSDVAQKNYLFLLKKSNANKLIPIAESSNINYRGFLQVGSALIFQYGIDDVNASAATTVVSSCAAISK
PGKQIPTLEDAKKELKIPDRDKEQNGNIARQRHVVNAYAVGRIDGEGGLFRFQLNEKGEWGNPQLLAKKIKRMDVQYIYV
SGCPEDEDAGKEEQFKYTDRFDRSVTPAGVEVLLDSGLNAKIAASSDNSIYAYRINATIRGGNVCANRTL
MKRKMLNVPKGGYDGMKGFTIVEFLVAGLLSIIVLIAVVSSYFTSRKLNDVANERLAEQQDLRNAATLIVRDARMAGSFG
CFNMSEHIKDVVVSDVAQKNYLFLLKKSNANKLIPIAESSNINYRGFLQVGSALIFQYGIDDVNASAATTVVSSCAAISK
PGKQIPTLEDAKKELKIPDRDKEQNGNIARQRHVVNAYAVGRIDGEGGLFRFQLNEKGEWGNPQLLAKKIKRMDVQYIYV
SGCPEDEDAGKEEQFKYTDRFDRSVTPAGVEVLLDSGLNAKIAASSDNSIYAYRINATIRGGNVCANRTL
Nucleotide
Download Length: 933 bp
>NTDB_id=348226 GIJ09_RS07010 WP_153707871.1 1284936..1285868(-) (pilJ) [Neisseria gonorrhoeae strain AUSMDU00010541]
ATGAAACGTAAAATGCTAAACGTACCAAAGGGCGGTTATGATGGTATGAAGGGTTTTACCATTGTTGAATTTCTGGTTGC
GGGCCTGCTCAGTATAATTGTCCTGATAGCGGTCGTATCGAGTTACTTTACATCCCGGAAATTAAATGATGTGGCAAACG
AGCGTCTTGCCGAGCAACAGGATTTGCGGAATGCGGCAACATTGATTGTCCGCGATGCAAGAATGGCGGGGAGCTTCGGT
TGCTTCAATATGTCTGAGCATATCAAAGATGTTGTTGTTTCCGATGTGGCGCAAAAAAACTATCTTTTTTTGTTAAAAAA
GAGCAATGCAAATAAACTTATCCCCATAGCGGAATCTTCAAATATCAATTATCGGGGTTTTCTCCAGGTTGGTAGCGCAT
TGATTTTTCAATACGGAATCGATGATGTTAATGCAAGCGCCGCGACTACCGTCGTCAGCAGCTGTGCCGCAATATCGAAA
CCGGGCAAGCAAATCCCTACTTTAGAAGATGCAAAAAAAGAATTGAAGATTCCGGATCGGGATAAGGAGCAAAATGGCAA
TATAGCGCGTCAAAGGCATGTGGTCAATGCCTATGCGGTCGGCAGGATTGACGGTGAGGGAGGTTTGTTCCGCTTCCAAT
TGAATGAAAAGGGCGAGTGGGGTAATCCTCAGTTGCTCGCGAAAAAGATTAAACGTATGGATGTGCAGTATATTTATGTT
TCCGGTTGTCCTGAAGATGAAGATGCCGGCAAAGAGGAACAATTCAAATATACGGATAGATTCGACAGATCTGTTACGCC
TGCCGGGGTGGAGGTTTTATTGGATAGCGGCCTTAATGCCAAGATTGCCGCTTCTTCAGACAATAGTATTTATGCTTACC
GTATCAATGCGACAATACGCGGGGGAAATGTATGCGCAAACAGAACACTTTGA
ATGAAACGTAAAATGCTAAACGTACCAAAGGGCGGTTATGATGGTATGAAGGGTTTTACCATTGTTGAATTTCTGGTTGC
GGGCCTGCTCAGTATAATTGTCCTGATAGCGGTCGTATCGAGTTACTTTACATCCCGGAAATTAAATGATGTGGCAAACG
AGCGTCTTGCCGAGCAACAGGATTTGCGGAATGCGGCAACATTGATTGTCCGCGATGCAAGAATGGCGGGGAGCTTCGGT
TGCTTCAATATGTCTGAGCATATCAAAGATGTTGTTGTTTCCGATGTGGCGCAAAAAAACTATCTTTTTTTGTTAAAAAA
GAGCAATGCAAATAAACTTATCCCCATAGCGGAATCTTCAAATATCAATTATCGGGGTTTTCTCCAGGTTGGTAGCGCAT
TGATTTTTCAATACGGAATCGATGATGTTAATGCAAGCGCCGCGACTACCGTCGTCAGCAGCTGTGCCGCAATATCGAAA
CCGGGCAAGCAAATCCCTACTTTAGAAGATGCAAAAAAAGAATTGAAGATTCCGGATCGGGATAAGGAGCAAAATGGCAA
TATAGCGCGTCAAAGGCATGTGGTCAATGCCTATGCGGTCGGCAGGATTGACGGTGAGGGAGGTTTGTTCCGCTTCCAAT
TGAATGAAAAGGGCGAGTGGGGTAATCCTCAGTTGCTCGCGAAAAAGATTAAACGTATGGATGTGCAGTATATTTATGTT
TCCGGTTGTCCTGAAGATGAAGATGCCGGCAAAGAGGAACAATTCAAATATACGGATAGATTCGACAGATCTGTTACGCC
TGCCGGGGTGGAGGTTTTATTGGATAGCGGCCTTAATGCCAAGATTGCCGCTTCTTCAGACAATAGTATTTATGCTTACC
GTATCAATGCGACAATACGCGGGGGAAATGTATGCGCAAACAGAACACTTTGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilJ | Neisseria gonorrhoeae MS11 |
86.581 |
100 |
0.874 |