Detailed information    

insolico Bioinformatically predicted

Overview

Name   hns   Type   Regulator
Locus tag   KAN02_RS17595 Genome accession   NZ_CP036171
Coordinates   3664876..3665202 (-) Length   108 a.a.
NCBI ID   WP_002053185.1    Uniprot ID   A0A0A7XV72
Organism   Acinetobacter nosocomialis strain KAN02     
Function   repress the expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3659876..3670202
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KAN02_RS17575 (KAN02_17575) - 3659971..3660603 (-) 633 WP_087605889.1 FHA domain-containing protein -
  KAN02_RS17580 (KAN02_17580) gspD 3660644..3662920 (-) 2277 WP_087605890.1 type II secretion system secretin GspD -
  KAN02_RS17585 (KAN02_17585) - 3662962..3663801 (-) 840 WP_004710893.1 type II secretion system protein N -
  KAN02_RS17590 (KAN02_17590) gspN 3663801..3664544 (-) 744 WP_004710896.1 type II secretion system protein N -
  KAN02_RS17595 (KAN02_17595) hns 3664876..3665202 (-) 327 WP_002053185.1 H-NS family nucleoid-associated regulatory protein Regulator
  KAN02_RS17600 (KAN02_17600) - 3665397..3665837 (-) 441 WP_005133332.1 acyl-CoA thioesterase -
  KAN02_RS17605 (KAN02_17605) - 3665845..3667037 (-) 1193 Protein_3406 heme biosynthesis protein HemY -
  KAN02_RS17610 (KAN02_17610) - 3667047..3667886 (-) 840 WP_087605891.1 hypothetical protein -
  KAN02_RS17615 (KAN02_17615) - 3667895..3668662 (-) 768 WP_039249037.1 uroporphyrinogen-III synthase -
  KAN02_RS17620 (KAN02_17620) hemC 3668667..3669584 (-) 918 WP_188198272.1 hydroxymethylbilane synthase -

Sequence

Protein


Download         Length: 108 a.a.        Molecular weight: 12478.12 Da        Isoelectric Point: 5.0524

>NTDB_id=347308 KAN02_RS17595 WP_002053185.1 3664876..3665202(-) (hns) [Acinetobacter nosocomialis strain KAN02]
MKPDISELSVEELKRLQEEAEALIASKKDQAIEDAYNQIIEIAENVGFSVEQLLEFGAQKRKKTTRKSVEPRYRNKNNSE
ETWTGRGKQPRWLVAEIEKGAKLEDFLI

Nucleotide


Download         Length: 327 bp        

>NTDB_id=347308 KAN02_RS17595 WP_002053185.1 3664876..3665202(-) (hns) [Acinetobacter nosocomialis strain KAN02]
ATGAAACCGGATATTAGTGAATTATCTGTTGAAGAGTTAAAACGCTTACAAGAAGAAGCAGAAGCTTTAATTGCAAGCAA
AAAAGATCAAGCAATTGAAGATGCATATAATCAAATTATCGAGATTGCTGAAAATGTAGGTTTTAGTGTTGAACAACTTC
TTGAGTTTGGTGCTCAAAAACGTAAGAAAACAACACGTAAATCTGTAGAGCCACGCTACCGTAACAAAAACAACTCTGAA
GAGACTTGGACTGGCCGCGGTAAACAACCACGCTGGTTAGTTGCTGAAATCGAAAAGGGTGCAAAACTTGAAGATTTCTT
AATCTAA

Domains

Predicted by InterproScan.

H-NS histone family (Histone_HNS)

(12-102)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0A7XV72

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  hns Acinetobacter baumannii strain A118

99.074

100

0.991

Multiple sequence alignment