Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | EXW46_RS06955 | Genome accession | NZ_CP036085 |
| Coordinates | 1359302..1359586 (+) | Length | 94 a.a. |
| NCBI ID | WP_000843037.1 | Uniprot ID | A0A366FUU6 |
| Organism | Bacillus mycoides strain JAS12/5 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1354302..1364586
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EXW46_RS06940 (EXW46_07025) | rnmV | 1355050..1355607 (-) | 558 | WP_002029323.1 | ribonuclease M5 | - |
| EXW46_RS06945 (EXW46_07030) | - | 1355867..1356634 (-) | 768 | WP_002009645.1 | TatD family hydrolase | - |
| EXW46_RS06950 (EXW46_07035) | metG | 1356800..1358782 (-) | 1983 | WP_002029324.1 | methionine--tRNA ligase | - |
| EXW46_RS06955 (EXW46_07040) | abrB | 1359302..1359586 (+) | 285 | WP_000843037.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Regulator |
| EXW46_RS06960 (EXW46_07045) | rsmI | 1359607..1360482 (-) | 876 | WP_002130208.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| EXW46_RS06965 (EXW46_07050) | - | 1360451..1360741 (-) | 291 | WP_002130207.1 | GIY-YIG nuclease family protein | - |
| EXW46_RS06970 (EXW46_07055) | - | 1360728..1361468 (-) | 741 | WP_002029328.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| EXW46_RS06975 (EXW46_07060) | yabA | 1361589..1361939 (-) | 351 | WP_002009639.1 | DNA replication initiation control protein YabA | - |
| EXW46_RS06980 (EXW46_07065) | - | 1361954..1362781 (-) | 828 | WP_002009637.1 | stage 0 sporulation family protein | - |
| EXW46_RS06985 (EXW46_07070) | holB | 1362787..1363770 (-) | 984 | WP_002009636.1 | DNA polymerase III subunit delta' | - |
| EXW46_RS06990 (EXW46_07075) | tmk | 1363806..1364432 (-) | 627 | WP_002130202.1 | dTMP kinase | - |
Sequence
Protein
Download Length: 94 a.a. Molecular weight: 10476.14 Da Isoelectric Point: 4.7174
>NTDB_id=346574 EXW46_RS06955 WP_000843037.1 1359302..1359586(+) (abrB) [Bacillus mycoides strain JAS12/5]
MKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDGNLSLAEGKIILSKEGAE
QVLNELQDYIETAK
MKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDGNLSLAEGKIILSKEGAE
QVLNELQDYIETAK
Nucleotide
Download Length: 285 bp
>NTDB_id=346574 EXW46_RS06955 WP_000843037.1 1359302..1359586(+) (abrB) [Bacillus mycoides strain JAS12/5]
ATGAAATCTACTGGTATCGTTCGTAAAGTTGATGAATTAGGTCGTGTAGTAATTCCAATCGAATTACGCCGTACTTTAGG
TATTGCAGAAAAGGATGCTCTTGAAATCTACGTTGATGATGAAAAAATCATCTTAAAGAAATATAAACCAAACATGACTT
GCCAAGTAACTGGTGAAGTATCTGATGGTAACCTATCTTTAGCTGAAGGTAAAATTATCTTAAGTAAAGAAGGCGCTGAA
CAAGTCTTAAACGAACTTCAAGATTATATCGAAACAGCAAAATAA
ATGAAATCTACTGGTATCGTTCGTAAAGTTGATGAATTAGGTCGTGTAGTAATTCCAATCGAATTACGCCGTACTTTAGG
TATTGCAGAAAAGGATGCTCTTGAAATCTACGTTGATGATGAAAAAATCATCTTAAAGAAATATAAACCAAACATGACTT
GCCAAGTAACTGGTGAAGTATCTGATGGTAACCTATCTTTAGCTGAAGGTAAAATTATCTTAAGTAAAGAAGGCGCTGAA
CAAGTCTTAAACGAACTTCAAGATTATATCGAAACAGCAAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
84.043 |
100 |
0.84 |