Detailed information NTG0346460

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: GII88_RS05690
• Genome accession: NZ_CP045814
• Coordinates: 1110282..1111400 (+)
• Length: 372 a.a.
• NCBI ID: WP_009328956.1
• Uniprot ID: -
• Organism: Bacillus licheniformis strain P8_B2
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 1105282..1116400

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GII88_RS05665 (GII88_05665)	-	1105482..1106987 (+)	1506	WP_025808244.1	coproporphyrinogen III oxidase	-
GII88_RS05670 (GII88_05670)	-	1107069..1108280 (-)	1212	WP_003180218.1	cation:proton antiporter	-
GII88_RS05675 (GII88_05675)	-	1108287..1108784 (-)	498	WP_003180220.1	cation:proton antiporter regulatory subunit	-
GII88_RS05680 (GII88_05680)	-	1108849..1109178 (-)	330	WP_016886161.1	hypothetical protein	-
GII88_RS05685 (GII88_05685)	-	1109379..1110155 (+)	777	WP_011197707.1	enoyl-CoA hydratase	-
GII88_RS05690 (GII88_05690)	rapC	1110282..1111400 (+)	1119	WP_009328956.1	Rap family tetratricopeptide repeat protein	Regulator
GII88_RS22590	-	1111390..1111527 (+)	138	WP_016886158.1	hypothetical protein	-
GII88_RS05695 (GII88_05695)	-	1111532..1111810 (+)	279	WP_003180226.1	hypothetical protein	-
GII88_RS05700 (GII88_05700)	-	1111885..1112070 (-)	186	WP_003180228.1	YhzD family protein	-
GII88_RS05705 (GII88_05705)	-	1112188..1113084 (+)	897	WP_003180230.1	ABC transporter ATP-binding protein	-
GII88_RS05710 (GII88_05710)	-	1113077..1114345 (+)	1269	WP_003180232.1	ABC transporter permease	-
GII88_RS05715 (GII88_05715)	-	1114465..1115691 (+)	1227	WP_009328954.1	DNA repair exonuclease	-

Sequence

Protein

• Length: 372 a.a.
• Molecular weight: 43356.03 Da
• Isoelectric Point: 5.5287

>NTDB_id=346460 GII88_RS05690 WP_009328956.1 1110282..1111400(+) (rapC) [Bacillus licheniformis strain P8_B2]
MKQKIPSEYVARKLNDWYNAIRKNQIAASESLKAEILNDFQDMEENQDVLLYYSLLEFRHKLMLSYLKPKETENIEKNLR
DLEEKEDQMTGLLNYYYWFFKGMYEFKQKRFVKAIGCYKTAEQKVSALEDEVEKAEFYYKLAEIYYYINQRYLSINYATL
ASDIFNRYETLKEKKIFCDFIIAGNWVESMTYGPALKSLANALEDARKIKNSHLTAAAHFNLGNCYFHQESYREASDHME
SALSIFEQESSSYIPKVLYNLMYVRLKQGNHAGAAACYEKGIRSAASLGDEEHAAKLNILCGLYLDGGDQKAVENGFDYL
ESNHLYAAVEELALDAAQYYNQIERLKDSIFYYEKCAQASRKIKRGDALYES

Nucleotide

• Length: 1119 bp

>NTDB_id=346460 GII88_RS05690 WP_009328956.1 1110282..1111400(+) (rapC) [Bacillus licheniformis strain P8_B2]
TTGAAACAGAAGATTCCATCTGAATACGTTGCTAGAAAGCTGAATGATTGGTACAACGCCATTCGGAAAAATCAGATCGC
CGCCAGTGAATCATTGAAAGCGGAAATTTTAAATGATTTTCAAGACATGGAAGAAAATCAGGACGTCCTGCTCTACTATT
CGCTGCTTGAATTCAGGCATAAACTGATGCTCAGCTATTTGAAACCGAAAGAGACTGAAAATATTGAAAAAAACCTCCGC
GACTTAGAAGAAAAAGAAGACCAAATGACGGGTTTATTAAACTATTATTACTGGTTTTTTAAAGGGATGTATGAGTTCAA
ACAAAAGCGGTTCGTCAAAGCAATCGGCTGCTATAAAACGGCTGAACAAAAAGTCAGCGCACTGGAAGACGAGGTTGAAA
AAGCGGAATTTTATTATAAGCTTGCGGAAATCTACTATTATATCAACCAGAGATACCTGTCGATCAACTATGCGACGCTA
GCTTCCGACATTTTTAACCGGTATGAAACGCTAAAAGAAAAAAAGATTTTCTGCGATTTTATCATTGCCGGTAATTGGGT
TGAATCGATGACATACGGACCCGCGCTGAAAAGCCTGGCCAATGCGCTTGAAGACGCCAGGAAAATCAAAAACAGCCATT
TGACGGCAGCCGCTCATTTTAATTTGGGAAATTGCTATTTCCACCAAGAATCGTACCGGGAAGCCTCAGATCATATGGAG
AGCGCCCTTTCCATTTTTGAACAGGAAAGTTCATCATATATTCCCAAAGTGCTGTACAACTTGATGTACGTCCGTCTCAA
GCAGGGGAACCATGCCGGAGCTGCCGCCTGTTATGAAAAAGGCATCCGAAGCGCGGCATCGCTCGGGGATGAAGAACACG
CGGCAAAGCTTAACATTCTGTGCGGGCTGTATTTAGACGGAGGGGATCAGAAAGCCGTGGAAAACGGATTTGATTATTTG
GAGTCAAATCATTTATATGCTGCTGTTGAAGAGCTGGCTTTAGATGCAGCCCAGTATTATAATCAAATTGAGCGGCTGAA
AGATTCCATTTTTTACTATGAAAAGTGCGCTCAGGCAAGTCGAAAAATCAAAAGGGGAGATGCGTTGTATGAAAGCTAA

Domains

Predicted by InterProScan.

• Tetratricopeptide repeat (TPR_12) (195-248)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-64)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	37.166	100	0.374