Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | EXW44_RS05045 | Genome accession | NZ_CP036057 |
| Coordinates | 1012780..1013103 (-) | Length | 107 a.a. |
| NCBI ID | WP_002030429.1 | Uniprot ID | A0A084J505 |
| Organism | Bacillus mycoides strain JAS06/1 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
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Genomic Context
Location: 1007780..1018103
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EXW44_RS05020 (EXW44_05135) | - | 1007958..1009244 (+) | 1287 | WP_215564139.1 | D-alanyl-D-alanine carboxypeptidase family protein | - |
| EXW44_RS05025 (EXW44_05140) | sipW | 1009442..1010011 (+) | 570 | WP_002064334.1 | signal peptidase I SipW | - |
| EXW44_RS05030 (EXW44_05145) | - | 1010078..1010665 (+) | 588 | WP_000172837.1 | CalY family protein | - |
| EXW44_RS05035 (EXW44_05150) | - | 1010827..1011660 (+) | 834 | WP_002168858.1 | DUF4047 domain-containing protein | - |
| EXW44_RS05040 (EXW44_05155) | calY | 1012104..1012697 (+) | 594 | WP_002126106.1 | biofilm matrix protein CalY | - |
| EXW44_RS05045 (EXW44_05160) | sinR | 1012780..1013103 (-) | 324 | WP_002030429.1 | helix-turn-helix domain-containing protein | Regulator |
| EXW44_RS05050 (EXW44_05165) | - | 1013183..1013317 (-) | 135 | WP_002011474.1 | anti-repressor SinI family protein | - |
| EXW44_RS05055 (EXW44_05170) | inhA1 | 1013660..1016047 (+) | 2388 | WP_002126109.1 | M6 family metalloprotease immune inhibitor InhA1 | - |
| EXW44_RS05060 (EXW44_05175) | - | 1016218..1017585 (+) | 1368 | WP_215564141.1 | aldehyde dehydrogenase | - |
Sequence
Protein
Download Length: 107 a.a. Molecular weight: 12274.04 Da Isoelectric Point: 7.2050
>NTDB_id=346322 EXW44_RS05045 WP_002030429.1 1012780..1013103(-) (sinR) [Bacillus mycoides strain JAS06/1]
MIGERIKRLRLQKGISLTELAEKAGVAKSYISSIERNLQKNPSIQFLEKIAAVLQIPVDTLLHDETTTEGHLDSEWTQLV
KDAMSSGVSKEQFREFLEFTQWKKNQQ
MIGERIKRLRLQKGISLTELAEKAGVAKSYISSIERNLQKNPSIQFLEKIAAVLQIPVDTLLHDETTTEGHLDSEWTQLV
KDAMSSGVSKEQFREFLEFTQWKKNQQ
Nucleotide
Download Length: 324 bp
>NTDB_id=346322 EXW44_RS05045 WP_002030429.1 1012780..1013103(-) (sinR) [Bacillus mycoides strain JAS06/1]
ATGATAGGAGAACGTATAAAACGCCTTCGTTTACAAAAAGGCATTTCATTAACAGAACTCGCCGAAAAAGCTGGTGTCGC
TAAATCTTACATTAGTTCTATAGAACGAAATTTACAAAAAAACCCTTCTATTCAGTTTCTTGAAAAAATTGCAGCTGTTC
TACAAATTCCAGTTGATACTTTACTTCACGATGAAACAACAACGGAGGGTCACCTAGACTCCGAATGGACACAGCTCGTT
AAAGATGCGATGAGCTCTGGTGTCTCAAAAGAACAGTTTCGTGAATTTCTCGAATTTACACAATGGAAGAAAAATCAACA
ATAA
ATGATAGGAGAACGTATAAAACGCCTTCGTTTACAAAAAGGCATTTCATTAACAGAACTCGCCGAAAAAGCTGGTGTCGC
TAAATCTTACATTAGTTCTATAGAACGAAATTTACAAAAAAACCCTTCTATTCAGTTTCTTGAAAAAATTGCAGCTGTTC
TACAAATTCCAGTTGATACTTTACTTCACGATGAAACAACAACGGAGGGTCACCTAGACTCCGAATGGACACAGCTCGTT
AAAGATGCGATGAGCTCTGGTGTCTCAAAAGAACAGTTTCGTGAATTTCTCGAATTTACACAATGGAAGAAAAATCAACA
ATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
67.89 |
100 |
0.692 |