Detailed information
Bioinformatically predicted
Overview
| Name | qstR | Type | Regulator |
| Locus tag | FOB70_RS04995 | Genome accession | NZ_CP044070 |
| Coordinates | 1046495..1047148 (+) | Length | 217 a.a. |
| NCBI ID | WP_005464121.1 | Uniprot ID | - |
| Organism | Vibrio parahaemolyticus strain FDAARGOS_662 | ||
| Function | promote expression of competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1041495..1052148
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FOB70_RS04975 (FOB70_04975) | - | 1042284..1043786 (+) | 1503 | WP_005498106.1 | efflux transporter outer membrane subunit | - |
| FOB70_RS04980 (FOB70_04980) | - | 1043972..1044226 (+) | 255 | WP_005498104.1 | hypothetical protein | - |
| FOB70_RS04985 (FOB70_04985) | - | 1044598..1045614 (+) | 1017 | WP_005479826.1 | GGDEF domain-containing protein | - |
| FOB70_RS04990 (FOB70_04990) | - | 1045680..1046495 (+) | 816 | WP_005479824.1 | helix-turn-helix domain-containing protein | - |
| FOB70_RS04995 (FOB70_04995) | qstR | 1046495..1047148 (+) | 654 | WP_005464121.1 | LuxR C-terminal-related transcriptional regulator | Regulator |
| FOB70_RS05000 (FOB70_05000) | - | 1047201..1049609 (-) | 2409 | WP_005498101.1 | glycosyl hydrolase 2 galactose-binding domain-containing protein | - |
| FOB70_RS05005 (FOB70_05005) | - | 1049914..1051497 (+) | 1584 | WP_021448149.1 | BCCT family transporter | - |
Sequence
Protein
Download Length: 217 a.a. Molecular weight: 24630.25 Da Isoelectric Point: 5.3293
>NTDB_id=340221 FOB70_RS04995 WP_005464121.1 1046495..1047148(+) (qstR) [Vibrio parahaemolyticus strain FDAARGOS_662]
MMNTNTTNNTVLLFTFNNIQGRGLQTAIEQNLEKPVLLTRGADVNFPSTRDEHYVAIVDSSLPELPEVKQTLSKLEHVDA
TVLVNAEPNLRIESLLTWSNLKGLFYFEDDFDKVMMGLKGILNGENWLSRDILNQLIGHLLSLNNTVGELETKLEMELTR
REMQVLSALCQGGSNLDIADSLFVSEHTVKSHLYSIFRKLEVKNRMQAITWAKRNLL
MMNTNTTNNTVLLFTFNNIQGRGLQTAIEQNLEKPVLLTRGADVNFPSTRDEHYVAIVDSSLPELPEVKQTLSKLEHVDA
TVLVNAEPNLRIESLLTWSNLKGLFYFEDDFDKVMMGLKGILNGENWLSRDILNQLIGHLLSLNNTVGELETKLEMELTR
REMQVLSALCQGGSNLDIADSLFVSEHTVKSHLYSIFRKLEVKNRMQAITWAKRNLL
Nucleotide
Download Length: 654 bp
>NTDB_id=340221 FOB70_RS04995 WP_005464121.1 1046495..1047148(+) (qstR) [Vibrio parahaemolyticus strain FDAARGOS_662]
ATGATGAATACCAACACAACCAACAACACCGTCTTATTGTTCACCTTCAACAACATTCAAGGTCGCGGCTTGCAAACCGC
TATTGAACAGAACCTAGAAAAACCCGTACTTTTAACCCGAGGCGCTGACGTCAATTTCCCTAGCACCCGCGATGAACACT
ATGTAGCGATAGTCGATAGCTCTCTCCCTGAATTGCCAGAGGTCAAACAAACACTCAGTAAGTTAGAGCACGTAGATGCG
ACTGTATTGGTCAACGCAGAACCGAATCTGCGGATCGAGAGCTTACTCACTTGGTCAAACTTAAAAGGTTTGTTCTATTT
TGAGGATGATTTCGACAAGGTAATGATGGGGCTAAAAGGCATTTTGAACGGAGAGAATTGGCTCTCTCGCGATATTCTCA
ATCAACTGATTGGCCACCTATTGAGCCTAAACAATACCGTCGGTGAGCTAGAAACGAAACTCGAAATGGAACTGACCCGT
CGTGAGATGCAAGTACTCTCCGCACTGTGTCAGGGTGGCTCAAACCTTGATATTGCCGACTCGCTCTTTGTCAGTGAGCA
CACGGTGAAATCGCACCTCTATAGTATTTTCCGTAAGCTCGAAGTCAAAAACCGCATGCAGGCCATTACGTGGGCAAAAC
GTAATTTGCTCTAG
ATGATGAATACCAACACAACCAACAACACCGTCTTATTGTTCACCTTCAACAACATTCAAGGTCGCGGCTTGCAAACCGC
TATTGAACAGAACCTAGAAAAACCCGTACTTTTAACCCGAGGCGCTGACGTCAATTTCCCTAGCACCCGCGATGAACACT
ATGTAGCGATAGTCGATAGCTCTCTCCCTGAATTGCCAGAGGTCAAACAAACACTCAGTAAGTTAGAGCACGTAGATGCG
ACTGTATTGGTCAACGCAGAACCGAATCTGCGGATCGAGAGCTTACTCACTTGGTCAAACTTAAAAGGTTTGTTCTATTT
TGAGGATGATTTCGACAAGGTAATGATGGGGCTAAAAGGCATTTTGAACGGAGAGAATTGGCTCTCTCGCGATATTCTCA
ATCAACTGATTGGCCACCTATTGAGCCTAAACAATACCGTCGGTGAGCTAGAAACGAAACTCGAAATGGAACTGACCCGT
CGTGAGATGCAAGTACTCTCCGCACTGTGTCAGGGTGGCTCAAACCTTGATATTGCCGACTCGCTCTTTGTCAGTGAGCA
CACGGTGAAATCGCACCTCTATAGTATTTTCCGTAAGCTCGAAGTCAAAAACCGCATGCAGGCCATTACGTGGGCAAAAC
GTAATTTGCTCTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| qstR | Vibrio cholerae strain A1552 |
39.819 |
100 |
0.406 |