Detailed information NTG0339185

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: ESP48_RS06175
• Genome accession: NZ_CP035306
• Coordinates: 1138558..1139496 (+)
• Length: 312 a.a.
• NCBI ID: WP_011680672.1
• Uniprot ID: A0A0E2Q3C4
• Organism: Streptococcus thermophilus strain IDCC2201
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1133558..1144496

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ESP48_RS06155 (ESP48_06155)	-	1135223..1136235 (+)	1013	Protein_1126	peptide ABC transporter substrate-binding protein	-
ESP48_RS06160 (ESP48_06160)	-	1136237..1136455 (+)	219	Protein_1127	ABC transporter permease subunit	-
ESP48_RS06165 (ESP48_06165)	-	1136466..1137500 (+)	1035	Protein_1128	ABC transporter permease	-
ESP48_RS06170 (ESP48_06170)	-	1137514..1138556 (+)	1043	Protein_1129	ABC transporter ATP-binding protein	-
ESP48_RS06175 (ESP48_06175)	amiF	1138558..1139496 (+)	939	WP_011680672.1	ABC transporter ATP-binding protein	Regulator
ESP48_RS10175	-	1139718..1139906 (+)	189	WP_011225379.1	hypothetical protein	-
ESP48_RS06185 (ESP48_06185)	hslO	1140053..1140919 (+)	867	WP_002949275.1	Hsp33 family molecular chaperone HslO	-
ESP48_RS06190 (ESP48_06190)	dusB	1140912..1141889 (+)	978	WP_011680674.1	tRNA dihydrouridine synthase DusB	-
ESP48_RS06195 (ESP48_06195)	-	1142118..1143386 (+)	1269	WP_011225384.1	peptidase	-
ESP48_RS06200 (ESP48_06200)	-	1143492..1143935 (+)	444	WP_014607905.1	zinc-dependent MarR family transcriptional regulator	-

Sequence

Protein

• Length: 312 a.a.
• Molecular weight: 35353.03 Da
• Isoelectric Point: 6.1917

>NTDB_id=339185 ESP48_RS06175 WP_011680672.1 1138558..1139496(+) (amiF) [Streptococcus thermophilus strain IDCC2201]
MTQERKKLVELKNVSLTFNKGKSNEVEAIDDVSFDIYEGEIFGLVGESGSGKTTIGRFVLKLSDIDSGTVTFSGNEISSL
KGKDLHDFRKIDQMIFQDPQSSLNGRMKIRDIIAEGIDIHKLAKSKEEREAKVKELIDLVGLNEDHLSRYPHEFSGGQRQ
RIGIARALAVNHHFIVADEPISALDVSIQAQVVNLMQKLQHEQGLTYLFIAHDLSIVKYISDRIGAMHWGKLLEVGPADE
IYHNPIHPYTKSLLSAIPEPDPERERKRQHLIYDSSIENDGENRQMYEIRPGHFVYTTVAEAKNYKEEVKSN

Nucleotide

• Length: 939 bp

>NTDB_id=339185 ESP48_RS06175 WP_011680672.1 1138558..1139496(+) (amiF) [Streptococcus thermophilus strain IDCC2201]
ATGACACAAGAACGTAAAAAGTTAGTAGAACTAAAAAATGTGTCTCTAACTTTTAATAAAGGAAAATCAAACGAGGTTGA
GGCTATTGATGACGTTAGCTTTGATATCTATGAGGGCGAAATTTTTGGACTAGTTGGAGAATCTGGATCAGGTAAAACAA
CCATTGGGCGATTTGTTTTAAAACTTTCTGATATTGATTCGGGTACTGTTACCTTTTCAGGTAATGAGATATCAAGTTTA
AAAGGGAAAGATCTTCATGATTTCCGTAAGATAGATCAGATGATCTTTCAAGATCCTCAATCTAGTCTTAATGGACGCAT
GAAAATCCGTGATATTATTGCTGAAGGCATTGATATTCATAAATTGGCTAAATCTAAGGAAGAGCGTGAAGCTAAGGTTA
AAGAACTCATTGATTTGGTAGGGTTAAATGAAGATCACCTATCAAGATATCCCCATGAGTTTTCTGGTGGTCAACGTCAA
AGGATTGGTATTGCGCGTGCTTTAGCGGTTAATCATCATTTTATTGTAGCAGACGAACCGATTTCTGCTTTGGATGTTTC
TATTCAAGCACAAGTGGTTAATTTGATGCAGAAGTTGCAACATGAACAGGGGTTAACTTATTTGTTTATTGCCCATGACC
TATCGATTGTTAAATATATATCCGATCGTATTGGTGCAATGCATTGGGGTAAACTTCTTGAAGTGGGACCAGCAGATGAG
ATCTATCATAACCCGATTCATCCTTATACAAAGAGTCTATTATCTGCAATTCCAGAACCAGATCCAGAAAGAGAGCGTAA
GCGTCAGCATTTGATTTACGATTCCTCTATTGAAAATGATGGGGAAAATAGACAAATGTATGAAATCCGACCAGGGCATT
TTGTTTATACTACAGTAGCAGAGGCTAAAAATTATAAAGAAGAAGTCAAGTCTAATTAA

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (30-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-265)

3D structure

• AlphaFold DB: A0A0E2Q3C4

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMD-9	53.115	97.756	0.519
amiF	Streptococcus thermophilus LMG 18311	52.787	97.756	0.516
amiF	Streptococcus salivarius strain HSISS4	52.459	97.756	0.513