Detailed information NTG0336291

Bioinformatically predicted

Overview

• Name: codY
• Type: Regulator
• Locus tag: EQY74_RS09715
• Genome accession: NZ_CP035228
• Coordinates: 1858046..1858825 (+)
• Length: 259 a.a.
• NCBI ID: WP_003181756.1
• Uniprot ID: A0A1Y0YKK2
• Organism: Bacillus licheniformis strain SRCM103529
• Function: repression of comK (predicted from homology) Competence regulation

Genomic Context

Location: 1853046..1863825

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EQY74_RS09695 (EQY74_09695)	trmFO	1853743..1855047 (+)	1305	WP_003181748.1	FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO	-
EQY74_RS09700 (EQY74_09700)	xerC	1855114..1856028 (+)	915	WP_003181750.1	tyrosine recombinase XerC	-
EQY74_RS09705 (EQY74_09705)	hslV	1856042..1856587 (+)	546	WP_003181752.1	ATP-dependent protease subunit HslV	-
EQY74_RS09710 (EQY74_09710)	hslU	1856595..1858007 (+)	1413	WP_254926368.1	HslU--HslV peptidase ATPase subunit	-
EQY74_RS09715 (EQY74_09715)	codY	1858046..1858825 (+)	780	WP_003181756.1	GTP-sensing pleiotropic transcriptional regulator CodY	Regulator
EQY74_RS09720 (EQY74_09720)	flgB	1859183..1859572 (+)	390	WP_128739421.1	flagellar basal body rod protein FlgB	-
EQY74_RS09725 (EQY74_09725)	flgC	1859572..1860024 (+)	453	WP_009328519.1	flagellar basal body rod protein FlgC	-
EQY74_RS09730 (EQY74_09730)	fliE	1860038..1860355 (+)	318	WP_003181764.1	flagellar hook-basal body complex protein FliE	-
EQY74_RS09735 (EQY74_09735)	fliF	1860406..1862007 (+)	1602	WP_003181766.1	flagellar basal-body MS-ring/collar protein FliF	-
EQY74_RS09740 (EQY74_09740)	fliG	1862021..1863037 (+)	1017	WP_003181768.1	flagellar motor switch protein FliG	-
EQY74_RS09745 (EQY74_09745)	fliH	1863021..1863788 (+)	768	WP_016885763.1	flagellar assembly protein FliH	-

Sequence

Protein

• Length: 259 a.a.
• Molecular weight: 29073.42 Da
• Isoelectric Point: 4.8196

>NTDB_id=336291 EQY74_RS09715 WP_003181756.1 1858046..1858825(+) (codY) [Bacillus licheniformis strain SRCM103529]
MALLQKTRKINAMLQNAAGKPVNFKEMAETLRDVIDSNIFVVSRRGKLLGFSINQQIENDRMKKMLEERQFPEDYTKSLF
NIPETSSNLDINSEYTAFPVENRDLFQAGLTTVVPIIGGGERLGTLILSRLQEKFEDDDLILAEYGATVVGMEILREKAE
EIEEEARSKAVVQMAISSLSYSELEAIEHIFEELDGNEGLLVASKIADRVGITRSVIVNALRKLESAGVIESRSLGMKGT
YIKVLNNKFLMELEKLKSH

Nucleotide

• Length: 780 bp

>NTDB_id=336291 EQY74_RS09715 WP_003181756.1 1858046..1858825(+) (codY) [Bacillus licheniformis strain SRCM103529]
ATGGCTTTATTACAAAAAACAAGAAAGATTAATGCAATGCTGCAAAATGCGGCAGGGAAGCCGGTTAATTTTAAAGAAAT
GGCCGAAACGCTTCGCGATGTGATTGATTCGAACATTTTCGTCGTCAGCCGCAGAGGAAAGCTTCTCGGTTTCTCGATCA
ACCAGCAGATCGAAAATGACCGGATGAAAAAAATGCTTGAAGAGCGCCAGTTTCCTGAAGATTATACAAAAAGCCTGTTC
AACATTCCGGAAACGTCATCTAACCTTGACATCAACAGCGAATACACAGCTTTCCCTGTGGAAAACCGCGATTTGTTCCA
AGCGGGTCTGACCACGGTCGTTCCGATCATCGGAGGAGGCGAAAGACTGGGCACCTTGATTCTGTCCCGCCTTCAGGAGA
AATTCGAGGATGACGATCTGATCCTTGCCGAATATGGCGCCACTGTCGTAGGAATGGAAATTCTCAGAGAGAAAGCGGAA
GAGATCGAAGAGGAAGCGCGCAGCAAAGCGGTCGTTCAAATGGCGATCAGTTCACTATCTTACAGCGAGCTTGAAGCAAT
TGAACATATTTTTGAGGAGCTTGACGGAAATGAAGGCCTGCTTGTCGCTAGTAAAATTGCAGACCGCGTCGGCATCACCC
GCTCGGTCATTGTCAACGCGCTCCGTAAACTTGAAAGCGCCGGTGTCATTGAATCAAGGTCACTAGGGATGAAAGGCACA
TACATCAAAGTGCTGAACAACAAATTTTTGATGGAGTTAGAAAAACTAAAGTCTCATTAA

Domains

Predicted by InterproScan.

• CodY helix-turn-helix domain (HTH_CodY) (198-255)

• CodY GAF-like domain (CodY) (3-178)

3D structure

• AlphaFold DB: A0A1Y0YKK2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
codY	Bacillus subtilis subsp. subtilis str. 168	94.595	100	0.946
codY	Lactococcus lactis subsp. lactis strain DGCC12653	47.451	98.456	0.467