Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | EQJ08_RS12200 | Genome accession | NZ_CP035167 |
| Coordinates | 2391530..2391865 (+) | Length | 111 a.a. |
| NCBI ID | WP_003226345.1 | Uniprot ID | A0AAE2VGU9 |
| Organism | Bacillus subtilis strain SRCM104008 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2386530..2396865
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EQJ08_RS12175 (EQJ08_12175) | gcvT | 2387121..2388209 (-) | 1089 | WP_038829737.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| EQJ08_RS12180 (EQJ08_12180) | hepAA | 2388651..2390324 (+) | 1674 | WP_038829735.1 | SNF2-related protein | - |
| EQJ08_RS12185 (EQJ08_12185) | yqhG | 2390345..2391139 (+) | 795 | WP_032726154.1 | YqhG family protein | - |
| EQJ08_RS12195 (EQJ08_12195) | sinI | 2391323..2391496 (+) | 174 | WP_014477323.1 | anti-repressor SinI | Regulator |
| EQJ08_RS12200 (EQJ08_12200) | sinR | 2391530..2391865 (+) | 336 | WP_003226345.1 | transcriptional regulator SinR | Regulator |
| EQJ08_RS12205 (EQJ08_12205) | tasA | 2391957..2392742 (-) | 786 | WP_014477324.1 | biofilm matrix protein TasA | - |
| EQJ08_RS12210 (EQJ08_12210) | sipW | 2392807..2393379 (-) | 573 | WP_077671469.1 | signal peptidase I SipW | - |
| EQJ08_RS12215 (EQJ08_12215) | tapA | 2393363..2394124 (-) | 762 | WP_032726156.1 | amyloid fiber anchoring/assembly protein TapA | - |
| EQJ08_RS12220 (EQJ08_12220) | yqzG | 2394396..2394722 (+) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| EQJ08_RS12225 (EQJ08_12225) | spoIITA | 2394764..2394943 (-) | 180 | WP_014480252.1 | YqzE family protein | - |
| EQJ08_RS12230 (EQJ08_12230) | comGG | 2395015..2395389 (-) | 375 | WP_032726157.1 | ComG operon protein ComGG | Machinery gene |
| EQJ08_RS12235 (EQJ08_12235) | comGF | 2395390..2395773 (-) | 384 | WP_032726158.1 | ComG operon protein ComGF | Machinery gene |
| EQJ08_RS12240 (EQJ08_12240) | comGE | 2395799..2396146 (-) | 348 | WP_021480020.1 | ComG operon protein 5 | Machinery gene |
| EQJ08_RS12245 (EQJ08_12245) | comGD | 2396130..2396561 (-) | 432 | WP_038829732.1 | comG operon protein ComGD | Machinery gene |
| EQJ08_RS12250 (EQJ08_12250) | comGC | 2396551..2396847 (-) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 12988.64 Da Isoelectric Point: 7.2023
>NTDB_id=335441 EQJ08_RS12200 WP_003226345.1 2391530..2391865(+) (sinR) [Bacillus subtilis strain SRCM104008]
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
Nucleotide
Download Length: 336 bp
>NTDB_id=335441 EQJ08_RS12200 WP_003226345.1 2391530..2391865(+) (sinR) [Bacillus subtilis strain SRCM104008]
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCAATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
CCAAAAAGAGGAGTAG
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCAATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
CCAAAAAGAGGAGTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |