Detailed information
Bioinformatically predicted
Overview
| Name | radA | Type | Machinery gene |
| Locus tag | SEQ_RS01530 | Genome accession | NC_012471 |
| Coordinates | 280432..281793 (+) | Length | 453 a.a. |
| NCBI ID | WP_012678954.1 | Uniprot ID | C0M6Z1 |
| Organism | Streptococcus equi subsp. equi 4047 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 275432..286793
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SEQ_RS01515 (SEQ_0293) | - | 276992..278788 (+) | 1797 | WP_012678951.1 | ABC transporter ATP-binding protein | - |
| SEQ_RS01520 (SEQ_0294) | - | 278950..279717 (+) | 768 | WP_012678952.1 | epoxyqueuosine reductase QueH | - |
| SEQ_RS01525 (SEQ_0295) | - | 279919..280365 (+) | 447 | WP_012678953.1 | dUTP diphosphatase | - |
| SEQ_RS01530 (SEQ_0296) | radA | 280432..281793 (+) | 1362 | WP_012678954.1 | DNA repair protein RadA | Machinery gene |
| SEQ_RS01535 | - | 281954..282232 (-) | 279 | WP_042356722.1 | hypothetical protein | - |
| SEQ_RS01540 (SEQ_0298) | - | 282615..283121 (+) | 507 | WP_012678595.1 | carbonic anhydrase | - |
| SEQ_RS01545 (SEQ_0299) | - | 283249..283962 (+) | 714 | WP_012678956.1 | TIGR00266 family protein | - |
| SEQ_RS01550 (SEQ_0300) | gltX | 284564..286009 (+) | 1446 | WP_012678957.1 | glutamate--tRNA ligase | - |
Sequence
Protein
Download Length: 453 a.a. Molecular weight: 49386.86 Da Isoelectric Point: 7.0274
>NTDB_id=33505 SEQ_RS01530 WP_012678954.1 280432..281793(+) (radA) [Streptococcus equi subsp. equi 4047]
MAKKKARFICGECGYQSPKYLGRCPNCSAWSSFVEETEVKDVKNARISLTGEKSKPIKLKHINGVRYQRIQTEMNEFNRV
LGGGVVPGSLVLIGGDPGIGKSTLLLQVSIQLADKGTVLYVSGEESAEQIKMRSDRLGQTDNDFYLYAETNMQAIRAEIE
AIQPDFLIIDSIQTIMSPEISGVQGSVSQVREVTAELLQLAKSNHIATFIVGHVTKEGTLAGPRMLEHMVDTVLYFEGER
HHTFRILRAVKNRFGSTNEIGIFDMQSGGLVEVLNPSQVFLEERLDGATGSAVVVTMEGSRPILAEVQALVIPTVFGNAR
RTTTGLDFNRVSLIMAVLEKRCGLLLQNQDAYLKSAGGVKLDEPAIDLAVAVAIASSYKEKPTNPQEAFLGEIGLTGDIR
RVTRIEQRINEAAKLGFTKLYAPKSSLQGIDLPKGIEVVGVTTVGEVLKAVFT
MAKKKARFICGECGYQSPKYLGRCPNCSAWSSFVEETEVKDVKNARISLTGEKSKPIKLKHINGVRYQRIQTEMNEFNRV
LGGGVVPGSLVLIGGDPGIGKSTLLLQVSIQLADKGTVLYVSGEESAEQIKMRSDRLGQTDNDFYLYAETNMQAIRAEIE
AIQPDFLIIDSIQTIMSPEISGVQGSVSQVREVTAELLQLAKSNHIATFIVGHVTKEGTLAGPRMLEHMVDTVLYFEGER
HHTFRILRAVKNRFGSTNEIGIFDMQSGGLVEVLNPSQVFLEERLDGATGSAVVVTMEGSRPILAEVQALVIPTVFGNAR
RTTTGLDFNRVSLIMAVLEKRCGLLLQNQDAYLKSAGGVKLDEPAIDLAVAVAIASSYKEKPTNPQEAFLGEIGLTGDIR
RVTRIEQRINEAAKLGFTKLYAPKSSLQGIDLPKGIEVVGVTTVGEVLKAVFT
Nucleotide
Download Length: 1362 bp
>NTDB_id=33505 SEQ_RS01530 WP_012678954.1 280432..281793(+) (radA) [Streptococcus equi subsp. equi 4047]
ATAGCTAAGAAAAAGGCGAGGTTTATCTGTGGAGAATGTGGCTATCAGTCACCCAAATATCTGGGGCGCTGCCCTAATTG
CTCTGCCTGGTCTTCCTTTGTAGAGGAGACAGAGGTCAAGGACGTCAAAAATGCCCGTATTAGCCTGACTGGAGAAAAAA
GTAAGCCCATCAAGCTAAAGCATATCAATGGCGTTCGCTACCAGCGTATCCAGACAGAGATGAATGAGTTCAATCGTGTG
CTGGGCGGTGGTGTTGTGCCGGGGAGCTTGGTTTTGATTGGTGGTGATCCTGGTATTGGTAAGTCAACGCTGCTCTTGCA
GGTTTCTATCCAGCTTGCGGATAAGGGAACTGTTTTATATGTCTCTGGAGAGGAATCGGCAGAGCAGATCAAGATGCGCA
GTGATCGTTTGGGACAGACCGACAATGATTTTTACCTCTATGCGGAGACCAATATGCAGGCTATTCGAGCAGAGATTGAA
GCCATTCAGCCGGATTTTTTGATTATTGATTCTATTCAGACGATCATGAGTCCGGAGATTTCGGGTGTTCAGGGCTCGGT
CAGTCAGGTTCGAGAGGTCACTGCTGAGCTGCTCCAGCTAGCTAAGTCTAATCATATTGCAACCTTTATTGTAGGACATG
TCACCAAGGAGGGCACCCTAGCAGGGCCTCGCATGCTGGAGCATATGGTTGATACGGTCCTTTATTTTGAGGGTGAGAGG
CATCATACCTTTCGTATCTTGCGAGCGGTTAAAAATCGTTTTGGCTCAACCAATGAGATTGGTATTTTTGACATGCAATC
AGGTGGGCTAGTGGAGGTCCTCAATCCCAGTCAGGTGTTCTTAGAGGAACGATTAGACGGCGCAACAGGCTCTGCTGTGG
TTGTCACCATGGAGGGGAGCAGACCGATTTTAGCTGAGGTGCAGGCCTTGGTGATACCGACTGTTTTTGGTAATGCTAGA
CGAACGACAACTGGGTTGGACTTTAATCGCGTCAGTCTGATTATGGCTGTCTTGGAAAAGCGATGTGGGCTGCTGCTACA
AAATCAAGATGCCTACCTCAAGTCAGCAGGCGGTGTGAAGCTAGATGAGCCTGCTATTGACTTGGCAGTTGCTGTGGCCA
TTGCCTCTAGCTACAAGGAAAAACCAACCAACCCTCAGGAGGCCTTTTTAGGAGAGATTGGCTTGACTGGTGATATTCGG
CGTGTGACCCGTATTGAGCAGCGGATTAATGAAGCCGCTAAGCTTGGCTTTACCAAGCTTTACGCTCCGAAAAGCTCATT
GCAGGGGATTGATCTGCCAAAAGGGATTGAGGTTGTTGGTGTGACGACAGTAGGAGAGGTCTTAAAGGCTGTCTTTACTT
AG
ATAGCTAAGAAAAAGGCGAGGTTTATCTGTGGAGAATGTGGCTATCAGTCACCCAAATATCTGGGGCGCTGCCCTAATTG
CTCTGCCTGGTCTTCCTTTGTAGAGGAGACAGAGGTCAAGGACGTCAAAAATGCCCGTATTAGCCTGACTGGAGAAAAAA
GTAAGCCCATCAAGCTAAAGCATATCAATGGCGTTCGCTACCAGCGTATCCAGACAGAGATGAATGAGTTCAATCGTGTG
CTGGGCGGTGGTGTTGTGCCGGGGAGCTTGGTTTTGATTGGTGGTGATCCTGGTATTGGTAAGTCAACGCTGCTCTTGCA
GGTTTCTATCCAGCTTGCGGATAAGGGAACTGTTTTATATGTCTCTGGAGAGGAATCGGCAGAGCAGATCAAGATGCGCA
GTGATCGTTTGGGACAGACCGACAATGATTTTTACCTCTATGCGGAGACCAATATGCAGGCTATTCGAGCAGAGATTGAA
GCCATTCAGCCGGATTTTTTGATTATTGATTCTATTCAGACGATCATGAGTCCGGAGATTTCGGGTGTTCAGGGCTCGGT
CAGTCAGGTTCGAGAGGTCACTGCTGAGCTGCTCCAGCTAGCTAAGTCTAATCATATTGCAACCTTTATTGTAGGACATG
TCACCAAGGAGGGCACCCTAGCAGGGCCTCGCATGCTGGAGCATATGGTTGATACGGTCCTTTATTTTGAGGGTGAGAGG
CATCATACCTTTCGTATCTTGCGAGCGGTTAAAAATCGTTTTGGCTCAACCAATGAGATTGGTATTTTTGACATGCAATC
AGGTGGGCTAGTGGAGGTCCTCAATCCCAGTCAGGTGTTCTTAGAGGAACGATTAGACGGCGCAACAGGCTCTGCTGTGG
TTGTCACCATGGAGGGGAGCAGACCGATTTTAGCTGAGGTGCAGGCCTTGGTGATACCGACTGTTTTTGGTAATGCTAGA
CGAACGACAACTGGGTTGGACTTTAATCGCGTCAGTCTGATTATGGCTGTCTTGGAAAAGCGATGTGGGCTGCTGCTACA
AAATCAAGATGCCTACCTCAAGTCAGCAGGCGGTGTGAAGCTAGATGAGCCTGCTATTGACTTGGCAGTTGCTGTGGCCA
TTGCCTCTAGCTACAAGGAAAAACCAACCAACCCTCAGGAGGCCTTTTTAGGAGAGATTGGCTTGACTGGTGATATTCGG
CGTGTGACCCGTATTGAGCAGCGGATTAATGAAGCCGCTAAGCTTGGCTTTACCAAGCTTTACGCTCCGAAAAGCTCATT
GCAGGGGATTGATCTGCCAAAAGGGATTGAGGTTGTTGGTGTGACGACAGTAGGAGAGGTCTTAAAGGCTGTCTTTACTT
AG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| radA | Streptococcus pneumoniae Rx1 |
84.292 |
99.779 |
0.841 |
| radA | Streptococcus pneumoniae D39 |
84.292 |
99.779 |
0.841 |
| radA | Streptococcus pneumoniae R6 |
84.292 |
99.779 |
0.841 |
| radA | Streptococcus pneumoniae TIGR4 |
84.292 |
99.779 |
0.841 |
| radA | Streptococcus mitis NCTC 12261 |
83.85 |
99.779 |
0.837 |
| radA | Streptococcus mitis SK321 |
83.85 |
99.779 |
0.837 |
| radA | Bacillus subtilis subsp. subtilis str. 168 |
61.369 |
100 |
0.614 |