Detailed information NTG0033080

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: HPPC_RS07230
• Genome accession: NC_014555
• Coordinates: 1495630..1497072 (-)
• Length: 480 a.a.
• NCBI ID: WP_000751640.1
• Uniprot ID: -
• Organism: Helicobacter pylori PeCan4
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1490630..1502072

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HPPC_RS07205 (HPPC_07460)	recG	1491764..1493635 (-)	1872	WP_001158374.1	ATP-dependent DNA helicase RecG	-
HPPC_RS07210 (HPPC_07465)	-	1493717..1494064 (+)	348	WP_000837055.1	hypothetical protein	-
HPPC_RS07215 (HPPC_07470)	-	1494068..1494703 (+)	636	WP_000765633.1	outer membrane protein	-
HPPC_RS07220 (HPPC_07475)	-	1494700..1495452 (-)	753	WP_000767491.1	exodeoxyribonuclease III	-
HPPC_RS07230 (HPPC_07480)	comH	1495630..1497072 (-)	1443	WP_000751640.1	hypothetical protein	Machinery gene
HPPC_RS07240 (HPPC_07485)	dnaA	1497301..1498668 (-)	1368	WP_000380575.1	chromosomal replication initiator protein DnaA	-
HPPC_RS07245 (HPPC_07490)	-	1498820..1499356 (+)	537	WP_000922944.1	purine-nucleoside phosphorylase	-
HPPC_RS07250 (HPPC_07495)	-	1499403..1499642 (+)	240	WP_000461849.1	DUF2443 family protein	-
HPPC_RS07255 (HPPC_07500)	glmS	1499643..1501436 (+)	1794	WP_000334363.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-

Sequence

Protein

• Length: 480 a.a.
• Molecular weight: 54770.57 Da
• Isoelectric Point: 6.5117

>NTDB_id=33080 HPPC_RS07230 WP_000751640.1 1495630..1497072(-) (comH) [Helicobacter pylori PeCan4]
MKKTLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPKQVLGVYNISPHKKLTLTITHISTAIVYQPLDE
KLSLETTLNPNRPTIPRNTQIVFSSKELKEAHAHQMPSLNAPMQKPQNKPSSSQQPSQNFSYPEPKLGSKNSKNSLLQPL
VTPSKVSPANEVKTPTNDANPPLKHSSEDQENNLFITPPTEKTLPNNNTPNADIDENNESNENRDNVEKQAVRDANIKEF
ACGKWVYDDENLQAYRPSVLKRVDEDKQTATDITPCDYSNAENKSGKITTPYTKISVHKTEPLEEPQTFEAKNNFAILQA
RSSTEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAVYERPKQDDQVEPTFYETSELAYSSTRKSEITHNE
LNLNEKFMEFVEVYEGHYLNDIIKESSEYKEWVKNHVRFKEGVCMALEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1443 bp

>NTDB_id=33080 HPPC_RS07230 WP_000751640.1 1495630..1497072(-) (comH) [Helicobacter pylori PeCan4]
ATGAAAAAAACCCTTTGTCTGTCTTTCTTTCTGACTTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAGCTTTTAGAAGA
AATCAAAACTTCCCCGCATAAAGGCACTTTTAAGGCTAAAGTCCTTGATTCTAAAGAACCCAAACAGGTTTTAGGCGTTT
ATAATATCTCCCCACACAAAAAACTCACGCTCACAATCACTCACATATCTACTGCAATTGTTTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGACCTTAAACCCTAACCGCCCTACTATCCCTAGAAACACCCAAATTGTTTTTTCTTCAAAAGA
ATTGAAAGAAGCGCACGCGCACCAAATGCCTTCTTTAAATGCACCCATGCAAAAACCACAAAATAAACCCAGCTCATCGC
AACAACCTTCTCAAAACTTTTCTTACCCAGAGCCCAAACTAGGCTCTAAAAACTCTAAAAACAGCCTTTTACAGCCTTTA
GTAACTCCCAGCAAAGTAAGCCCTGCTAATGAAGTTAAAACGCCAACAAACGACGCTAATCCCCCTTTAAAACATTCTTC
AGAAGATCAAGAAAACAACCTCTTTATAACGCCACCCACTGAAAAAACGCTCCCTAATAACAACACCCCTAACGCTGATA
TTGATGAAAACAATGAAAGCAACGAAAATAGGGACAATGTGGAAAAACAAGCCGTTAGAGATGCTAATATTAAAGAATTT
GCATGCGGGAAGTGGGTTTATGACGATGAAAATTTACAAGCCTATCGCCCAAGCGTTTTAAAACGCGTTGATGAAGACAA
ACAAACTGCGACAGATATTACCCCTTGCGATTACAGCAACGCTGAAAATAAAAGCGGTAAAATCACTACCCCCTATACTA
AAATCTCTGTCCATAAAACAGAGCCTTTAGAAGAGCCACAAACTTTTGAAGCTAAAAATAATTTCGCCATTCTTCAAGCC
AGAAGCTCTACAGAAAAATGCAAAAGGGCTAGAGCAAGAAAAGACGGCACGACTAGGCAATGCTATCTGATAGAAGAGCC
TTTAAAACAAGCGTGGGAAAGCGAGTATGAAATCACCACGCAATTAGTAAAAGCCGTATATGAGCGCCCCAAACAAGACG
ATCAAGTAGAGCCGACTTTTTATGAAACCAGCGAATTGGCTTATTCTTCCACACGAAAAAGCGAAATAACGCATAATGAA
TTGAATTTGAATGAAAAATTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATATAATCAAAGAGAGCAG
TGAATACAAAGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGCCTTAGAAATAGAAGAGCAACCAC
GAGCTAAAAGCACGCCTTTGAGCATTGAAAACTCTCGTGTGGTGTGTGTCAAAAAGGGGAATTATTTATTCAACGAAGTT
TAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	95	100	0.95