Detailed information NTG0329411

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: EIB71_RS04900
• Genome accession: NZ_CP034158
• Coordinates: 1087883..1088992 (-)
• Length: 369 a.a.
• NCBI ID: WP_124757568.1
• Uniprot ID: -
• Organism: Kaistella daneshvariae strain H3001
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1082883..1093992

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EIB71_RS04880 (EIB71_04880)	-	1084031..1084951 (+)	921	WP_394365663.1	glutaminase	-
EIB71_RS04885 (EIB71_04885)	-	1085093..1085476 (-)	384	WP_124757566.1	group III truncated hemoglobin	-
EIB71_RS04890 (EIB71_04890)	-	1085691..1086185 (+)	495	WP_124757567.1	YkgJ family cysteine cluster protein	-
EIB71_RS04895 (EIB71_04895)	gdhA	1086341..1087699 (-)	1359	WP_123266254.1	NADP-specific glutamate dehydrogenase	-
EIB71_RS04900 (EIB71_04900)	dprA	1087883..1088992 (-)	1110	WP_124757568.1	DNA-processing protein DprA	Machinery gene
EIB71_RS04905 (EIB71_04905)	-	1089021..1089791 (-)	771	WP_124757569.1	rhomboid family intramembrane serine protease	-
EIB71_RS04910 (EIB71_04910)	-	1089939..1091048 (+)	1110	WP_124757570.1	DUF3078 domain-containing protein	-
EIB71_RS04915 (EIB71_04915)	-	1091195..1091971 (+)	777	WP_124757571.1	DUF4382 domain-containing protein	-
EIB71_RS04920 (EIB71_04920)	-	1092019..1093554 (-)	1536	WP_124757572.1	YifB family Mg chelatase-like AAA ATPase	-

Sequence

Protein

• Length: 369 a.a.
• Molecular weight: 41179.30 Da
• Isoelectric Point: 7.8530

>NTDB_id=329411 EIB71_RS04900 WP_124757568.1 1087883..1088992(-) (dprA) [Kaistella daneshvariae strain H3001]
MRSEEVLYSIALRRCPLIGDVIFQKLINEAGSAKQVWELSKSGLQNIFGIGRKIALEIGNKEHLHFAEAEIKFCEKHHIK
INLRHLGDLPPQLNFCDDAPAILYQKGSLRAHKNFVSIVGTRNISAYGKSFIHDFLHEIKTQNVATVSGLALGVDTEVHE
VSLQNSLPTIAVLAHGFHTLYPAKNRRLAERILAEGGMLLTEFNSSQKPDRENFIQRNRIIAGLSPATIVVETAFGGGSV
STATFANNYNRDVYALPGRIDEKYSQGCNQLIFQNKATAISTVSGLITELGYNKQKEEIGELFPSSEIRLLLPQNQQDIL
DQLHKKIPISLDEISEKLQLPSYKILPDLLQLEISGYIRALSGRQYLLL

Nucleotide

• Length: 1110 bp

>NTDB_id=329411 EIB71_RS04900 WP_124757568.1 1087883..1088992(-) (dprA) [Kaistella daneshvariae strain H3001]
ATGCGTTCCGAAGAGGTTTTATATTCCATCGCGCTGCGCCGCTGTCCGCTTATTGGTGATGTCATTTTTCAGAAGCTGAT
TAACGAAGCCGGCTCCGCAAAGCAGGTGTGGGAACTTTCGAAATCAGGCTTGCAGAATATTTTCGGAATTGGAAGAAAAA
TTGCCCTCGAAATCGGGAATAAAGAACATTTGCATTTCGCGGAAGCGGAAATTAAATTCTGCGAAAAACACCACATCAAA
ATAAATCTTCGGCATTTAGGCGATTTACCGCCGCAGCTTAATTTCTGTGACGATGCACCCGCGATTCTTTACCAAAAAGG
CAGTTTGCGCGCACACAAAAATTTCGTGAGCATTGTCGGAACGCGAAATATTTCTGCGTACGGCAAAAGTTTTATCCACG
ATTTTTTACATGAAATAAAAACTCAAAATGTAGCTACAGTCAGCGGTTTGGCTTTAGGCGTGGATACCGAAGTTCATGAA
GTTTCTCTGCAAAACTCGTTGCCGACAATCGCCGTTTTAGCACATGGTTTTCACACGCTTTATCCGGCAAAAAACCGCCG
ATTAGCCGAGAGAATTTTGGCTGAAGGCGGAATGCTTTTAACTGAATTTAATTCTTCCCAAAAGCCCGACCGCGAAAATT
TCATCCAGCGGAACCGGATTATCGCAGGTCTGTCACCAGCAACCATCGTGGTAGAAACTGCTTTTGGTGGCGGCTCCGTA
AGCACGGCAACATTCGCTAATAATTACAACCGCGATGTTTATGCGCTGCCGGGCAGAATTGATGAAAAATACAGCCAGGG
CTGCAACCAGCTTATTTTTCAAAATAAAGCAACCGCGATTTCCACCGTTTCCGGTCTCATAACCGAACTTGGCTACAACA
AGCAAAAAGAAGAGATCGGCGAACTTTTTCCCTCTTCCGAAATCAGGTTGCTTTTACCACAAAATCAGCAGGATATTTTA
GACCAGCTTCATAAAAAAATTCCGATCTCTTTAGATGAAATTTCGGAAAAGCTGCAATTGCCTTCCTACAAAATTTTACC
CGATTTGCTTCAGCTGGAAATTTCCGGATACATTCGTGCACTTTCCGGTAGGCAATATTTGCTTTTGTGA

Domains

Predicted by InterproScan.

• DprA winged helix domain (DprA_WH) (314-363)

• DNA recombination-mediator protein A (DNA_processg_A) (74-279)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Riemerella anatipestifer ATCC 11845 = DSM 15868	55.285	100	0.553