Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | FIU18_RS23240 | Genome accession | NZ_CP041008 |
| Coordinates | 4954705..4955202 (-) | Length | 165 a.a. |
| NCBI ID | WP_003114685.1 | Uniprot ID | A0A0H2ZGD4 |
| Organism | Pseudomonas aeruginosa strain FDAARGOS_767 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 4949705..4960202
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FIU18_RS23220 (FIU18_23220) | pchD | 4950489..4952132 (+) | 1644 | WP_003114688.1 | pyochelin biosynthesis salicyl-AMP ligase PchD | - |
| FIU18_RS23225 (FIU18_23225) | pchC | 4952129..4952884 (+) | 756 | WP_003114687.1 | pyochelin biosynthesis editing thioesterase PchC | - |
| FIU18_RS23230 (FIU18_23230) | pchB | 4952884..4953189 (+) | 306 | WP_003106950.1 | isochorismate lyase PchB | - |
| FIU18_RS23235 (FIU18_23235) | pchA | 4953186..4954616 (+) | 1431 | WP_003114686.1 | isochorismate synthase PchA | - |
| FIU18_RS23240 (FIU18_23240) | ssb | 4954705..4955202 (-) | 498 | WP_003114685.1 | single-stranded DNA-binding protein | Machinery gene |
| FIU18_RS23245 (FIU18_23245) | - | 4955219..4956607 (-) | 1389 | WP_003103910.1 | MFS transporter | - |
| FIU18_RS23250 (FIU18_23250) | uvrA | 4956821..4959658 (+) | 2838 | WP_003093663.1 | excinuclease ABC subunit UvrA | Machinery gene |
| FIU18_RS23255 (FIU18_23255) | bfr | 4959730..4960194 (-) | 465 | WP_003093668.1 | bacterioferritin | - |
Sequence
Protein
Download Length: 165 a.a. Molecular weight: 18557.46 Da Isoelectric Point: 5.2781
>NTDB_id=324202 FIU18_RS23240 WP_003114685.1 4954705..4955202(-) (ssb) [Pseudomonas aeruginosa strain FDAARGOS_767]
MARGVNKVILVGNVGGDPETRYMPNGNAVTNITLATSESWKDKQTGQQQERTEWHRVVFFGRLAEIAGEYLRKGSQVYVE
GSLRTRKWQGQDGQDRYTTEIVVDINGNMQLLGGRPSGDDSQRAPREPMQRPQQAPQQQSRPAPQQQPAPQPAQDYDSFD
DDIPF
MARGVNKVILVGNVGGDPETRYMPNGNAVTNITLATSESWKDKQTGQQQERTEWHRVVFFGRLAEIAGEYLRKGSQVYVE
GSLRTRKWQGQDGQDRYTTEIVVDINGNMQLLGGRPSGDDSQRAPREPMQRPQQAPQQQSRPAPQQQPAPQPAQDYDSFD
DDIPF
Nucleotide
Download Length: 498 bp
>NTDB_id=324202 FIU18_RS23240 WP_003114685.1 4954705..4955202(-) (ssb) [Pseudomonas aeruginosa strain FDAARGOS_767]
ATGGCCCGTGGGGTTAACAAAGTCATTCTGGTTGGTAACGTCGGTGGTGACCCGGAAACCCGCTACATGCCCAACGGCAA
TGCGGTGACCAACATCACCCTCGCCACCAGCGAGAGCTGGAAGGACAAGCAGACCGGCCAGCAACAGGAGCGCACCGAAT
GGCACCGCGTGGTGTTCTTCGGCCGCCTGGCGGAGATCGCCGGCGAGTACCTGCGCAAGGGTTCCCAGGTCTACGTCGAA
GGCAGCCTGCGCACCCGCAAGTGGCAGGGCCAGGACGGTCAGGATCGCTACACCACCGAGATCGTGGTCGACATCAACGG
CAACATGCAGTTGCTCGGCGGCCGCCCCTCCGGCGACGATTCGCAGCGCGCCCCGCGCGAGCCCATGCAGCGCCCGCAGC
AGGCCCCGCAGCAGCAGTCGCGTCCGGCCCCGCAGCAGCAACCGGCGCCGCAACCGGCCCAGGACTACGACAGCTTCGAC
GACGACATTCCGTTCTAA
ATGGCCCGTGGGGTTAACAAAGTCATTCTGGTTGGTAACGTCGGTGGTGACCCGGAAACCCGCTACATGCCCAACGGCAA
TGCGGTGACCAACATCACCCTCGCCACCAGCGAGAGCTGGAAGGACAAGCAGACCGGCCAGCAACAGGAGCGCACCGAAT
GGCACCGCGTGGTGTTCTTCGGCCGCCTGGCGGAGATCGCCGGCGAGTACCTGCGCAAGGGTTCCCAGGTCTACGTCGAA
GGCAGCCTGCGCACCCGCAAGTGGCAGGGCCAGGACGGTCAGGATCGCTACACCACCGAGATCGTGGTCGACATCAACGG
CAACATGCAGTTGCTCGGCGGCCGCCCCTCCGGCGACGATTCGCAGCGCGCCCCGCGCGAGCCCATGCAGCGCCCGCAGC
AGGCCCCGCAGCAGCAGTCGCGTCCGGCCCCGCAGCAGCAACCGGCGCCGCAACCGGCCCAGGACTACGACAGCTTCGAC
GACGACATTCCGTTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
58.659 |
100 |
0.636 |
| ssb | Glaesserella parasuis strain SC1401 |
52.486 |
100 |
0.576 |
| ssb | Neisseria gonorrhoeae MS11 |
48.045 |
100 |
0.521 |
| ssb | Neisseria meningitidis MC58 |
47.486 |
100 |
0.515 |