Detailed information    

insolico Bioinformatically predicted

Overview

Name   comX/sigX/comX2/sigX2   Type   Regulator
Locus tag   EB818_RS01480 Genome accession   NZ_CP033335
Coordinates   272676..273227 (+) Length   183 a.a.
NCBI ID   WP_010921894.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain TSPY208     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 267676..278227
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EB818_RS01480 (EB818_01485) comX/sigX/comX2/sigX2 272676..273227 (+) 552 WP_010921894.1 sigma-70 family RNA polymerase sigma factor Regulator
  EB818_RS01485 (EB818_01490) - 273786..274313 (+) 528 WP_002991099.1 YqeG family HAD IIIA-type phosphatase -
  EB818_RS01490 (EB818_01495) yqeH 274313..275431 (+) 1119 WP_111674473.1 ribosome biogenesis GTPase YqeH -
  EB818_RS01495 (EB818_01500) yhbY 275456..275764 (+) 309 WP_002991094.1 ribosome assembly RNA-binding protein YhbY -
  EB818_RS01500 (EB818_01505) - 275833..276465 (+) 633 WP_014407306.1 nicotinate-nucleotide adenylyltransferase -
  EB818_RS01505 (EB818_01510) yqeK 276462..277055 (+) 594 WP_020904900.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  EB818_RS01510 (EB818_01515) rsfS 277079..277432 (+) 354 WP_011017339.1 ribosome silencing factor -
  EB818_RS01515 (EB818_01520) - 277480..278223 (+) 744 WP_021775484.1 class I SAM-dependent methyltransferase -

Sequence

Protein


Download         Length: 183 a.a.        Molecular weight: 22281.08 Da        Isoelectric Point: 10.0375

>NTDB_id=323009 EB818_RS01480 WP_010921894.1 272676..273227(+) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain TSPY208]
MSCCFFVVLFILGIVKKKRRLKMSIETRAAFEKVKPIILKLKRHYYIQLWDRDDWLQEGHIILLQLLERYPELIEEEERL
YRYFKTKFSSYLKDLLRRQESQKRQFHKLAYEEIGEVAHAIPSRGLWLDDYVAYQEVIASLENQLNSQERMQFQALIRGE
RFKGRRALLRKISPYFKEFAQQL

Nucleotide


Download         Length: 552 bp        

>NTDB_id=323009 EB818_RS01480 WP_010921894.1 272676..273227(+) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain TSPY208]
GTGTCCTGTTGTTTTTTTGTGGTTCTCTTTATACTAGGGATAGTTAAAAAGAAAAGGAGACTCAAAATGTCGATAGAGAC
AAGAGCAGCGTTTGAAAAAGTTAAGCCCATTATTTTGAAATTAAAGCGACACTATTATATTCAATTGTGGGATAGAGATG
ACTGGTTACAAGAAGGACATATTATCTTATTACAGTTACTAGAAAGGTACCCAGAGTTAATTGAGGAAGAAGAGCGTTTA
TATCGCTATTTTAAAACAAAATTTTCATCTTATTTGAAAGATTTATTACGCCGTCAAGAAAGTCAAAAGCGTCAGTTCCA
TAAGTTAGCATATGAAGAGATAGGGGAGGTTGCACATGCCATTCCATCGAGAGGGTTATGGCTAGACGACTATGTGGCTT
ATCAAGAGGTAATAGCTAGCTTAGAGAACCAATTAAATTCGCAAGAGCGTATGCAGTTTCAAGCACTTATCAGGGGCGAA
CGTTTCAAGGGAAGACGTGCTCTACTTAGGAAGATCAGTCCCTATTTTAAGGAATTTGCACAGCAGTTGTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.