Detailed information NTG0315425

Bioinformatically predicted

Overview

• Name: vicK
• Type: Regulator
• Locus tag: D5R90_RS02005
• Genome accession: NZ_CP032400
• Coordinates: 418075..419433 (-)
• Length: 452 a.a.
• NCBI ID: WP_119773864.1
• Uniprot ID: -
• Organism: Streptococcus iniae strain YM011
• Function: repress comCDE expression; repress comX expression (predicted from homology) Competence regulation

Genomic Context

Location: 413075..424433

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D5R90_RS01995 (D5R90_01995)	rnc	416467..417159 (-)	693	WP_003101331.1	ribonuclease III	-
D5R90_RS02000 (D5R90_02000)	vicX	417262..418071 (-)	810	WP_003101333.1	MBL fold metallo-hydrolase	Regulator
D5R90_RS02005 (D5R90_02005)	vicK	418075..419433 (-)	1359	WP_119773864.1	cell wall metabolism sensor histidine kinase VicK	Regulator
D5R90_RS02010 (D5R90_02010)	vicR	419426..420136 (-)	711	WP_003101337.1	response regulator YycF	Regulator
D5R90_RS02015 (D5R90_02015)	-	420393..421190 (+)	798	WP_003101338.1	amino acid ABC transporter ATP-binding protein	-
D5R90_RS02020 (D5R90_02020)	-	421187..422017 (+)	831	WP_016356082.1	transporter substrate-binding domain-containing protein	-
D5R90_RS02025 (D5R90_02025)	-	422032..422733 (+)	702	WP_003101340.1	amino acid ABC transporter permease	-
D5R90_RS02030 (D5R90_02030)	-	422749..423396 (+)	648	WP_003101341.1	amino acid ABC transporter permease	-

Sequence

Protein

• Length: 452 a.a.
• Molecular weight: 51564.97 Da
• Isoelectric Point: 4.8809

>NTDB_id=315425 D5R90_RS02005 WP_119773864.1 418075..419433(-) (vicK) [Streptococcus iniae strain YM011]
MTKDIIGNLSLFELAILSLLIFVAVYFVHLALRDYRNAKIIRQMSHKIRDLINGRYTDDINQKADIELMELSEQLNDLSD
VFRLSHENLAQEKNRLASILAYMSNGVLATDRSGQILMINETAQKQLNLSREEALQKNITDLLDNDTPYTYRELVSKTPV
VTLNRRDEMGEFITLRLRFALNRRESGFISGLVVVLHDMTEQEKEERERRLFVSNVSHELRTPLTSVKSYLEALDEGALK
EEIAPNFIKVSLDETNRMMRMISDLLNLSRIDNNVTTLAVEMTNFTAFMTSILNRFDLVKTQNTVAGKSYEIIRDYPITS
VWVEIDNDKMTQVIENILNNAIKYSPDGGKIGVKMKTTDTQLIISISDEGLGIPKKDLPLIFDLFYRVDKARSRAQGGTG
LGLAIAKEIIKQHNGFIWAKSDYGKGSTFTIVLPYEKDVMTDGEDDWEDDID

Nucleotide

• Length: 1359 bp

>NTDB_id=315425 D5R90_RS02005 WP_119773864.1 418075..419433(-) (vicK) [Streptococcus iniae strain YM011]
ATGACTAAAGATATTATTGGTAACTTATCCTTATTTGAATTAGCAATTCTGTCTCTTCTTATTTTTGTTGCTGTTTATTT
TGTCCACTTGGCTCTTCGTGATTATCGAAACGCTAAGATTATTAGACAAATGAGCCATAAAATACGGGACTTGATTAATG
GTCGTTATACTGATGACATTAATCAAAAGGCAGATATTGAATTAATGGAGCTGTCTGAACAGTTAAACGACTTATCAGAT
GTTTTTCGCTTAAGCCATGAAAATTTAGCCCAGGAAAAAAATCGTTTGGCCAGTATTCTTGCCTATATGAGCAATGGTGT
CTTGGCAACTGACCGATCAGGTCAAATTTTGATGATTAATGAAACAGCACAAAAACAATTGAATTTAAGCCGTGAAGAAG
CTCTGCAAAAAAACATTACAGATTTACTTGATAATGACACTCCTTACACCTATCGGGAATTAGTGTCTAAAACACCTGTT
GTGACCTTAAACCGACGTGATGAAATGGGAGAATTTATAACCTTAAGATTGCGTTTTGCCTTAAATCGCCGTGAAAGTGG
TTTTATTTCAGGATTAGTTGTCGTTTTACATGACATGACCGAGCAAGAAAAAGAAGAACGAGAACGTCGTCTCTTTGTTT
CTAATGTTAGTCATGAATTAAGAACGCCATTAACATCTGTTAAGTCATATTTAGAGGCTTTGGATGAAGGTGCCTTAAAA
GAAGAAATTGCCCCCAATTTTATCAAGGTTTCTTTAGATGAGACAAATCGTATGATGCGGATGATTTCTGATCTTTTGAA
TTTATCAAGAATTGACAATAATGTAACGACCTTAGCTGTTGAAATGACTAACTTTACAGCCTTTATGACCTCTATTTTAA
ACCGTTTTGACTTGGTTAAAACGCAAAATACAGTTGCAGGGAAAAGCTATGAAATTATTCGAGATTATCCCATTACATCT
GTATGGGTTGAGATTGATAATGATAAAATGACACAAGTCATTGAAAATATTCTTAACAATGCCATTAAGTATTCCCCAGA
TGGTGGAAAGATTGGTGTTAAGATGAAAACTACTGACACGCAATTGATTATCTCTATTTCTGATGAAGGATTGGGCATAC
CTAAAAAAGACTTGCCATTGATTTTTGATCTTTTTTACCGTGTTGATAAGGCTAGAAGTCGCGCCCAAGGTGGTACTGGC
TTAGGCTTGGCTATTGCAAAAGAAATTATTAAGCAACACAATGGCTTTATTTGGGCAAAAAGTGACTATGGCAAGGGCTC
TACATTTACCATTGTCTTGCCATATGAAAAAGATGTGATGACAGATGGAGAAGATGATTGGGAGGATGATATAGACTAA

Domains

Predicted by InterproScan.

• PAS fold (PAS) (95-198)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (326-436)

• His Kinase A (phospho-acceptor) domain (HisKA) (209-273)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
vicK	Streptococcus mutans UA159	72.639	91.372	0.664
micB	Streptococcus pneumoniae Cp1015	65.647	94.027	0.617