Detailed information NTG0313882

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: CDG61_RS16250
• Genome accession: NZ_CP032143
• Coordinates: 3329235..3330605 (+)
• Length: 456 a.a.
• NCBI ID: WP_416240720.1
• Uniprot ID: -
• Organism: Acinetobacter sp. WCHAc010052
• Function: regulation of type IV pilus assembly (predicted from homology) Competence regulation

Genomic Context

Location: 3324235..3335605

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CDG61_RS16230 (CDG61_16230)	thrC	3324394..3325533 (+)	1140	WP_087513577.1	threonine synthase	-
CDG61_RS16235 (CDG61_16235)	pbpG	3325628..3326692 (-)	1065	WP_087551513.1	D-alanyl-D-alanine endopeptidase PBP7/8	-
CDG61_RS16240 (CDG61_16240)	-	3326928..3327563 (+)	636	WP_087551514.1	response regulator	-
CDG61_RS16245 (CDG61_16245)	pilS	3327588..3329159 (+)	1572	WP_087513574.1	sensor histidine kinase	Regulator
CDG61_RS16250 (CDG61_16250)	pilR	3329235..3330605 (+)	1371	WP_416240720.1	sigma-54-dependent transcriptional regulator	Regulator
CDG61_RS16255 (CDG61_16255)	-	3330615..3331784 (-)	1170	WP_087551516.1	S41 family peptidase	-
CDG61_RS16260 (CDG61_16260)	gpmI	3331806..3333353 (-)	1548	WP_087551517.1	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	-
CDG61_RS16265 (CDG61_16265)	lptG	3333468..3334538 (-)	1071	WP_087513570.1	LPS export ABC transporter permease LptG	-

Sequence

Protein

• Length: 456 a.a.
• Molecular weight: 51392.04 Da
• Isoelectric Point: 6.6513

>NTDB_id=313882 CDG61_RS16250 WP_416240720.1 3329235..3330605(+) (pilR) [Acinetobacter sp. WCHAc010052]
MEMTLARMGIKTHIAHRLSEARQLLSEHQYDACLTDLNLPDGNGLELVNLISQHFPQLPVAVLTAYGNMEIAIAALKAGA
FDFVSKPVNQKHLEQLLEKALNKPVEKNSVPESDQLEHRMLIGQSLPIQHLRTTLKKIARSQAPVFITGESGTGKEVVAN
LIHRLSNRCEGPFIAINCGAIPGDLMESELFGHKKGSFTGATQDKQGLIQSAHGGSLFLDEIAELPLSMQVKLLRAVQEK
RIRPIGSEAEIDVDFRVISASHQDLEELVQQGRFRQDLFFRIHVMDLVLPALRERGSDILLLAQHFIHKICKEWDIETKP
LTERARQFLLEQYYPGNVRELRNIIERAITLSDDSQIDLQHLQSAPLRQFSVKPLQSSSETEETAPQTVSEPVVSSTRKL
PEEGLELHLEKVEKEILMNALNLTHWNRTLAAKKLGMSFRSLRYRLKKFGLDSDED

Nucleotide

• Length: 1371 bp

>NTDB_id=313882 CDG61_RS16250 WP_416240720.1 3329235..3330605(+) (pilR) [Acinetobacter sp. WCHAc010052]
ATGGAAATGACCCTTGCACGTATGGGGATTAAAACACACATCGCACACCGCCTTTCAGAGGCGAGACAACTGCTTTCAGA
ACATCAGTATGATGCCTGTCTGACGGATCTGAATCTGCCTGATGGCAATGGCCTGGAGCTGGTCAATCTGATCTCGCAGC
ATTTCCCACAGCTTCCAGTGGCAGTGTTGACTGCTTATGGAAATATGGAAATTGCGATCGCAGCACTGAAAGCCGGTGCC
TTTGATTTTGTCAGTAAACCTGTCAATCAGAAGCACCTGGAACAGTTACTTGAAAAAGCACTGAACAAGCCTGTTGAAAA
AAACAGTGTCCCTGAATCTGATCAGCTCGAACACCGTATGCTGATTGGTCAGTCACTGCCGATTCAGCATCTGCGTACAA
CACTGAAAAAAATTGCCCGCTCCCAGGCACCTGTGTTTATTACGGGTGAATCCGGTACGGGTAAAGAAGTTGTTGCCAAT
CTGATCCATCGGCTCAGTAACCGCTGTGAAGGCCCTTTTATTGCGATCAACTGCGGAGCGATTCCTGGTGATCTGATGGA
AAGCGAACTGTTTGGCCACAAGAAAGGCAGTTTTACCGGTGCAACCCAGGACAAGCAAGGCTTAATCCAGTCTGCACATG
GCGGCAGCCTGTTCCTCGACGAAATCGCTGAACTGCCTTTAAGCATGCAGGTCAAACTGTTACGTGCAGTTCAGGAAAAG
CGGATACGCCCTATTGGCAGTGAAGCAGAAATTGATGTCGATTTCCGGGTGATCAGTGCCAGTCACCAGGATCTGGAAGA
ACTGGTTCAACAGGGCAGATTCCGCCAGGATTTATTTTTCCGTATTCACGTCATGGATCTGGTTCTGCCTGCACTGCGTG
AACGTGGCAGTGATATTTTACTGCTGGCGCAGCACTTCATTCATAAAATCTGTAAAGAATGGGATATTGAAACCAAACCT
CTGACTGAAAGAGCCCGCCAGTTCCTGCTTGAACAGTACTATCCGGGCAACGTCCGTGAACTTCGCAATATTATTGAACG
TGCCATCACGCTCAGTGATGACAGCCAGATTGATCTTCAGCATTTACAGAGCGCGCCTTTACGTCAGTTCTCGGTAAAAC
CGCTGCAAAGCAGCAGTGAAACTGAAGAAACAGCACCTCAGACAGTCAGCGAACCTGTCGTTTCTTCCACACGGAAGTTA
CCCGAGGAAGGTCTGGAACTTCATCTGGAGAAGGTTGAAAAAGAAATTCTGATGAATGCTTTGAATCTGACCCACTGGAA
CAGAACACTGGCAGCAAAAAAACTGGGAATGTCTTTCCGTTCTTTGCGCTACCGCCTGAAAAAATTTGGGCTGGACAGCG
ACGAAGACTGA

Domains

Predicted by InterproScan.

• Sigma-54 interaction domain (Sigma54_activat) (121-287)

• Bacterial regulatory protein, Fis family (HTH_8) (409-449)

• Response regulator receiver domain (Response_reg) (4-97)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Acinetobacter baumannii strain A118	72.807	100	0.728
pilR	Pseudomonas aeruginosa PAK	49.336	99.123	0.489