Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   DXX91_RS07485 Genome accession   NZ_CP031424
Coordinates   1401167..1401763 (+) Length   198 a.a.
NCBI ID   WP_003154591.1    Uniprot ID   -
Organism   Bacillus velezensis strain B-4     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1396167..1406763
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DXX91_RS07455 - 1396381..1396836 (+) 456 WP_003154599.1 flavodoxin -
  DXX91_RS07460 dapD 1396918..1397628 (+) 711 WP_003154598.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  DXX91_RS07465 - 1397699..1398823 (+) 1125 WP_014304923.1 N-acetyldiaminopimelate deacetylase -
  DXX91_RS07470 - 1398884..1399129 (+) 246 WP_003154596.1 YkuS family protein -
  DXX91_RS07475 - 1399163..1399969 (-) 807 WP_003154595.1 mechanosensitive ion channel family protein -
  DXX91_RS07480 - 1400257..1400715 (+) 459 WP_115996932.1 TlpA disulfide reductase family protein -
  DXX91_RS07485 rok 1401167..1401763 (+) 597 WP_003154591.1 transcriptional regulator Rok Regulator
  DXX91_RS07490 - 1401784..1402776 (-) 993 WP_115996282.1 sporulation protein -
  DXX91_RS07495 - 1402922..1403524 (+) 603 WP_003154587.1 molybdenum cofactor guanylyltransferase -
  DXX91_RS07500 - 1403576..1404595 (+) 1020 WP_115996283.1 molybdopterin-synthase adenylyltransferase MoeB -
  DXX91_RS07505 glp 1404613..1405905 (+) 1293 WP_015388302.1 gephyrin-like molybdotransferase Glp -
  DXX91_RS07510 mobB 1405866..1406387 (+) 522 WP_041482361.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22525.57 Da        Isoelectric Point: 9.6909

>NTDB_id=306674 DXX91_RS07485 WP_003154591.1 1401167..1401763(+) (rok) [Bacillus velezensis strain B-4]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDNTGSLSDTKKEFRPEKKSDSLPVLAELAAQEMRSYQKPQ
TQPQSSQPQMQSITSLPAGIPDGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFM
QSLIKMYPEVKKPYRGQYILEGEISQETAETANDTAAE

Nucleotide


Download         Length: 597 bp        

>NTDB_id=306674 DXX91_RS07485 WP_003154591.1 1401167..1401763(+) (rok) [Bacillus velezensis strain B-4]
ATGTTTAATGAAAGAGAAGCGCTGCGCTTACGTTTAGAACAATTGAACGAAGCAGAGGTAAAAGTCATTCGTGAATATCA
AATAGAACGTGATAAAATATATGCAAAACTGAGAGAATTAGACAATACGGGCAGCCTGTCCGATACAAAAAAAGAGTTTC
GTCCGGAGAAAAAAAGTGACTCTCTCCCGGTGCTTGCAGAGCTTGCAGCACAGGAAATGAGAAGCTATCAAAAGCCGCAG
ACACAGCCGCAATCCTCCCAGCCGCAGATGCAGTCTATTACGTCTCTTCCCGCCGGCATTCCAGACGGTTCTACAAGAAG
AAGAAGAGGGACGGCGAGACCGGGATCAAAAGCGGCAAAACTGCGCGAAGCAGCGATTAAAACATTGAAACGCCACAATG
CAGCGATCAAAAGTTCCGAACTGCAAAAGGAAATTGAAAAGGAAAGCGGCCTTGAAATTCCTAATATGACAACATTTATG
CAAAGCTTAATTAAAATGTATCCGGAAGTGAAAAAACCATACCGCGGCCAATATATTCTTGAGGGAGAAATTTCTCAGGA
AACAGCAGAAACGGCAAATGATACGGCTGCTGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

86.082

97.98

0.843

Multiple sequence alignment