Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptB   Type   Regulator
Locus tag   ETT49_RS06500 Genome accession   NZ_CP035450
Coordinates   1286752..1287786 (-) Length   344 a.a.
NCBI ID   WP_136269354.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm93.4     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1281752..1292786
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT49_RS06465 (ETT49_06460) - 1282528..1282830 (-) 303 WP_002983488.1 YlxQ-related RNA-binding protein -
  ETT49_RS06470 (ETT49_06465) rnpM 1282823..1283119 (-) 297 WP_002983486.1 RNase P modulator RnpM -
  ETT49_RS06475 (ETT49_06470) nusA 1283135..1284292 (-) 1158 WP_002988817.1 transcription termination factor NusA -
  ETT49_RS06480 (ETT49_06475) rimP 1284467..1285003 (-) 537 WP_002988815.1 ribosome maturation factor RimP -
  ETT49_RS06490 (ETT49_06485) trmB 1285262..1285897 (-) 636 WP_002983387.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  ETT49_RS06495 (ETT49_06490) ccrZ 1285897..1286688 (-) 792 WP_002983385.1 cell cycle regulator CcrZ -
  ETT49_RS06500 (ETT49_06495) pptB 1286752..1287786 (-) 1035 WP_136269354.1 ABC transporter permease Regulator
  ETT49_RS06505 (ETT49_06500) pptA 1287789..1288514 (-) 726 WP_136269352.1 ABC transporter ATP-binding protein Regulator
  ETT49_RS06510 (ETT49_06505) - 1288586..1289005 (+) 420 WP_002988659.1 HIT family protein -
  ETT49_RS06515 (ETT49_06510) - 1289002..1289358 (+) 357 WP_002988657.1 hypothetical protein -
  ETT49_RS06520 (ETT49_06515) brpA 1289469..1290749 (-) 1281 WP_002988654.1 biofilm formation/cell division transcriptional regulator BrpA -
  ETT49_RS06525 (ETT49_06520) - 1290758..1291282 (-) 525 WP_136269350.1 GNAT family N-acetyltransferase -
  ETT49_RS06530 (ETT49_06525) tsaE 1291257..1291718 (-) 462 WP_002983367.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -

Sequence

Protein


Download         Length: 344 a.a.        Molecular weight: 40273.53 Da        Isoelectric Point: 10.4168

>NTDB_id=303098 ETT49_RS06500 WP_136269354.1 1286752..1287786(-) (pptB) [Streptococcus pyogenes strain emm93.4]
MKALFLKRRQNFQKQQNKYLRYVLNDHFVLVLMFLLGFAMVQYGQLLNHFPTNHLPIQVCLGILIPLLLSMGSIATYLEE
ADQHFLLPKEEEVISYIKQAERLSFLLWGTLQTAVLLFLYPIFRRLGLSLFIFIILVLILLALKRVVLSRKTRYFLRGNR
LDWAKAVAFESNRKQSILKFYSLFTTVKGISTKVKERTYLNPLLKLVKQTPSNLWLSLYARAFLRSSDYLGLFLRLMLLS
SLSVFFIHNLYLSVSLALIFNYLVVFQLLSLYYHYDYHYMTSLYPENSRSKKKNMLSFLRGLSFLMLIVNMLCCSSAPKA
LILIVGMVFIACIYLPYKLKKIID

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=303098 ETT49_RS06500 WP_136269354.1 1286752..1287786(-) (pptB) [Streptococcus pyogenes strain emm93.4]
ATGAAAGCATTATTTCTGAAACGCCGTCAAAACTTTCAAAAACAACAAAACAAATACCTTCGTTACGTCTTAAATGATCA
CTTTGTTTTGGTGTTGATGTTTTTATTAGGCTTTGCTATGGTGCAGTATGGTCAGCTACTAAACCATTTTCCAACGAATC
ATCTACCTATTCAGGTTTGTCTTGGGATATTGATCCCATTATTGCTCAGTATGGGATCTATAGCAACGTATCTAGAAGAG
GCAGATCAGCATTTCTTACTTCCAAAAGAAGAAGAAGTGATTTCTTATATCAAACAAGCTGAGCGACTCTCTTTTTTGCT
TTGGGGAACTTTGCAGACTGCTGTATTGCTCTTTTTATATCCTATTTTTAGACGTTTAGGTCTGTCTTTATTTATTTTTA
TTATCTTAGTTTTGATATTATTGGCACTAAAAAGAGTAGTGCTTAGTCGAAAGACAAGATATTTTTTGAGAGGAAATCGT
TTAGATTGGGCAAAAGCTGTCGCATTTGAAAGCAATCGCAAGCAAAGTATTTTAAAGTTTTATTCTCTTTTTACAACAGT
CAAAGGAATTTCTACAAAAGTGAAAGAAAGAACTTATCTAAATCCTCTTTTAAAATTAGTTAAGCAAACTCCTTCAAACC
TTTGGCTGTCCCTTTATGCTAGAGCCTTTTTACGTAGTTCAGATTATTTGGGCTTATTTTTACGACTAATGCTATTAAGC
TCATTATCTGTATTTTTTATCCATAATCTTTATTTGTCAGTAAGTTTAGCACTCATTTTTAACTATTTAGTTGTATTCCA
ATTACTTTCCCTTTATTATCACTACGATTACCATTATATGACTAGTCTTTATCCTGAAAATAGTCGGAGCAAGAAGAAAA
ATATGTTAAGTTTTTTACGAGGTTTAAGCTTTTTAATGTTAATCGTCAATATGCTGTGTTGCTCATCAGCGCCAAAAGCA
CTCATTTTGATTGTAGGTATGGTTTTCATAGCTTGTATATATCTACCTTATAAGTTAAAGAAGATCATTGACTAA

Domains

Predicted by InterProScan.

Bacterial ABC transporter protein EcsB (EcsB)

(158-330)

Bacterial ABC transporter protein EcsB (EcsB)

(2-151)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

43.023

100

0.43
  pptB Streptococcus salivarius strain HSISS4

42.733

100

0.427