Detailed information    

insolico Bioinformatically predicted

Overview


Name   irvR   Type   Regulator
Locus tag   ETT64_RS00645 Genome accession   NZ_CP035435
Coordinates   92979..93746 (-) Length   255 a.a.
NCBI ID   WP_003058809.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm64.3     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 87979..98746
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT64_RS00620 (ETT64_00620) - 88393..89112 (+) 720 WP_136293158.1 metal ABC transporter ATP-binding protein -
  ETT64_RS00625 (ETT64_00625) - 89105..89920 (+) 816 WP_021340473.1 metal ABC transporter permease -
  ETT64_RS00630 (ETT64_00630) - 89960..90343 (-) 384 WP_136272095.1 HIT family protein -
  ETT64_RS00635 (ETT64_00635) - 90507..91652 (-) 1146 WP_032465792.1 site-specific integrase -
  ETT64_RS00640 (ETT64_00640) - 91974..92117 (+) 144 WP_011185066.1 putative holin-like toxin -
  ETT64_RS00645 (ETT64_00645) irvR 92979..93746 (-) 768 WP_003058809.1 helix-turn-helix transcriptional regulator Regulator
  ETT64_RS00650 (ETT64_00650) - 93900..94106 (+) 207 WP_002992503.1 helix-turn-helix transcriptional regulator -
  ETT64_RS00655 (ETT64_00655) - 94140..94340 (+) 201 WP_002992502.1 helix-turn-helix domain-containing protein -
  ETT64_RS00660 (ETT64_00660) - 94361..94768 (+) 408 WP_002992501.1 hypothetical protein -
  ETT64_RS00665 (ETT64_00665) - 94781..95410 (+) 630 WP_022555253.1 Rha family transcriptional regulator -
  ETT64_RS00670 (ETT64_00670) - 95656..95997 (+) 342 WP_136293157.1 hypothetical protein -
  ETT64_RS00675 (ETT64_00675) - 95984..96205 (+) 222 WP_010922763.1 hypothetical protein -
  ETT64_RS00680 (ETT64_00680) - 96208..96399 (+) 192 WP_021775551.1 hypothetical protein -
  ETT64_RS00685 (ETT64_00685) - 96411..96740 (+) 330 WP_003058810.1 hypothetical protein -
  ETT64_RS00690 (ETT64_00690) - 96743..97015 (+) 273 WP_000051914.1 hypothetical protein -
  ETT64_RS00695 (ETT64_00695) - 97016..97882 (+) 867 WP_136293156.1 primase alpha helix C-terminal domain-containing protein -

Sequence


Protein


Download         Length: 255 a.a.        Molecular weight: 28725.00 Da        Isoelectric Point: 4.3544

>NTDB_id=301615 ETT64_RS00645 WP_003058809.1 92979..93746(-) (irvR) [Streptococcus pyogenes strain emm64.3]
MAKNSPQDLINREIFSTNLNMLMAKKNIKQIDIHNKLGIPKSTITGYVKGRSLPTAGNVQKLADFFGVLKSDIDPRFDSN
NIETNSNIIPSTLQKVTSTLSQLEHKRQLNVLDYAETQLEQQNTVEEPQATYYTYNYYDHAASAGTGQYLNDVQVETIEL
PVDYDADFVIPVYGDSMEPEYHSGDYVFIKLSINLSDGDIGVFEYYGDAYIKQLVINDSGAFLHSLNDKYDDILIDRDSD
FRIIGEVIGSFTSKS

Nucleotide


Download         Length: 768 bp        

>NTDB_id=301615 ETT64_RS00645 WP_003058809.1 92979..93746(-) (irvR) [Streptococcus pyogenes strain emm64.3]
ATGGCTAAAAATAGTCCCCAAGATTTAATAAATAGAGAAATTTTCTCAACAAATCTCAACATGCTTATGGCTAAAAAGAA
TATCAAACAGATAGATATTCACAACAAACTAGGAATACCTAAGAGTACGATAACTGGCTATGTTAAAGGTCGTTCACTCC
CAACTGCTGGAAACGTTCAAAAGCTGGCGGACTTCTTCGGAGTTCTAAAATCAGACATTGACCCCCGTTTTGATTCTAAT
AATATTGAAACAAATAGTAATATTATCCCATCAACCCTACAAAAAGTAACATCTACTTTATCTCAGCTAGAACACAAGCG
ACAATTAAACGTCCTTGATTATGCTGAAACACAATTAGAACAACAAAACACAGTAGAAGAACCACAAGCCACCTACTACA
CTTACAATTACTACGACCACGCAGCTTCAGCTGGTACAGGTCAGTATCTAAATGATGTACAAGTAGAAACAATTGAATTA
CCAGTCGATTACGACGCTGATTTTGTCATACCGGTTTATGGCGATTCTATGGAACCCGAATACCATTCTGGGGACTATGT
ATTTATCAAACTATCTATTAACCTGTCAGATGGTGATATAGGAGTTTTTGAGTATTACGGTGATGCTTATATCAAACAAC
TTGTTATAAACGATTCTGGAGCGTTTCTGCATAGTCTGAACGACAAGTATGACGATATACTCATAGATAGAGATAGTGAT
TTCCGTATTATCGGAGAAGTTATTGGGAGTTTTACATCTAAATCATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  irvR Streptococcus mutans UA159

34

100

0.4


Multiple sequence alignment