Detailed information
Bioinformatically predicted
Overview
| Name | rapC | Type | Regulator |
| Locus tag | ETL58_RS04125 | Genome accession | NZ_CP035413 |
| Coordinates | 773043..774173 (+) | Length | 376 a.a. |
| NCBI ID | WP_029317429.1 | Uniprot ID | - |
| Organism | Bacillus subtilis strain SRCM103629 | ||
| Function | inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation |
||
Genomic Context
Location: 768043..779173
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ETL58_RS04105 (ETL58_04105) | - | 768369..768764 (-) | 396 | WP_029317425.1 | immunity 22 family protein | - |
| ETL58_RS04110 (ETL58_04110) | - | 768777..770663 (-) | 1887 | WP_029317426.1 | T7SS effector LXG polymorphic toxin | - |
| ETL58_RS04115 (ETL58_04115) | - | 770876..771892 (+) | 1017 | WP_029317427.1 | hypothetical protein | - |
| ETL58_RS04120 (ETL58_04120) | - | 772036..772878 (+) | 843 | WP_224913002.1 | hypothetical protein | - |
| ETL58_RS04125 (ETL58_04125) | rapC | 773043..774173 (+) | 1131 | WP_029317429.1 | response regulator aspartate phosphatase RapH | Regulator |
| ETL58_RS04130 (ETL58_04130) | phrH | 774163..774336 (+) | 174 | WP_029317430.1 | phosphatase RapH inhibitor PhrH | - |
| ETL58_RS04135 (ETL58_04135) | yeeI | 774496..775215 (+) | 720 | WP_003233863.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| ETL58_RS04140 (ETL58_04140) | yeeK | 775349..775786 (+) | 438 | WP_003244206.1 | spore coat protein YeeK | - |
| ETL58_RS04145 (ETL58_04145) | yezE | 775901..776485 (+) | 585 | WP_003243181.1 | TetR/AcrR family transcriptional regulator | - |
| ETL58_RS04150 (ETL58_04150) | yesE | 776564..777007 (+) | 444 | WP_003233857.1 | nuclear transport factor 2 family protein | - |
| ETL58_RS04155 (ETL58_04155) | yesF | 777004..777869 (+) | 866 | Protein_770 | NAD-dependent epimerase/dehydratase family protein | - |
| ETL58_RS04160 (ETL58_04160) | cotJA | 777998..778246 (+) | 249 | WP_003219489.1 | spore coat-associated protein CotJA | - |
| ETL58_RS04165 (ETL58_04165) | cotJB | 778230..778493 (+) | 264 | WP_003219491.1 | spore coat protein CotJB | - |
| ETL58_RS04170 (ETL58_04170) | cotJC | 778508..779077 (+) | 570 | WP_003233850.1 | spore coat protein CotJC | - |
Sequence
Protein
Download Length: 376 a.a. Molecular weight: 43998.26 Da Isoelectric Point: 5.5861
>NTDB_id=300482 ETL58_RS04125 WP_029317429.1 773043..774173(+) (rapC) [Bacillus subtilis strain SRCM103629]
MSQAIPSSRVGVKINEWYKMIRQFSVPDAEILKAEVEQDIQQMEEDQDLLIYYSLMCFRHQLMLDYLEPGQTYGNRPTVT
ELLETIETPQKKLTGLLKYYSLFFRGMYEFDQKEYVEAIGYYREAEKELPFVSDEIEKAEFHFKVAEAYYHMKQTHVSMH
HILQALDIYQNNPLYSIRTIQSLFVIAGNYDDFKHYDKALPHLETALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAV
EHFQKAAKVSREKVPDLLPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITARSHKFYKELFLFLQAVYKETVDERKIHDL
LSYFEKKNLHAYIEACARSAAAVFESSCHFEQAAAFYRKVLKAQEDILKGECLYAY
MSQAIPSSRVGVKINEWYKMIRQFSVPDAEILKAEVEQDIQQMEEDQDLLIYYSLMCFRHQLMLDYLEPGQTYGNRPTVT
ELLETIETPQKKLTGLLKYYSLFFRGMYEFDQKEYVEAIGYYREAEKELPFVSDEIEKAEFHFKVAEAYYHMKQTHVSMH
HILQALDIYQNNPLYSIRTIQSLFVIAGNYDDFKHYDKALPHLETALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAV
EHFQKAAKVSREKVPDLLPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITARSHKFYKELFLFLQAVYKETVDERKIHDL
LSYFEKKNLHAYIEACARSAAAVFESSCHFEQAAAFYRKVLKAQEDILKGECLYAY
Nucleotide
Download Length: 1131 bp
>NTDB_id=300482 ETL58_RS04125 WP_029317429.1 773043..774173(+) (rapC) [Bacillus subtilis strain SRCM103629]
TTGAGTCAAGCCATACCGTCTTCGCGTGTAGGTGTTAAGATTAATGAATGGTATAAAATGATTCGCCAGTTCAGTGTTCC
GGATGCTGAGATTCTGAAAGCGGAGGTTGAGCAGGACATTCAGCAGATGGAAGAAGACCAGGATTTGCTGATCTATTATT
CTCTGATGTGTTTTCGGCACCAGCTGATGCTTGATTATTTGGAGCCGGGACAAACATACGGGAATCGCCCTACAGTGACA
GAGCTTCTTGAAACGATTGAGACCCCTCAGAAAAAACTCACAGGCCTTTTGAAATACTACTCTTTGTTTTTCCGCGGCAT
GTATGAATTTGATCAAAAAGAATATGTGGAAGCGATCGGGTATTATCGCGAGGCGGAGAAAGAACTGCCGTTTGTGTCAG
ATGAAATTGAGAAAGCGGAATTCCATTTTAAAGTGGCCGAAGCGTATTATCACATGAAGCAAACCCATGTGTCGATGCAT
CATATTCTTCAAGCTTTAGACATTTATCAAAACAATCCCCTATACAGCATTAGAACGATACAAAGCTTGTTTGTGATCGC
TGGCAACTATGATGATTTCAAACATTATGATAAAGCGCTCCCGCATTTAGAGACGGCGCTGGAATTGGCAATGGACATTC
AAAATGACAGGTTTATCGCCATTTCTCTATTGAACATCGCGAACAGCTATGACAGATCAGGAGACGATCAGATGGCTGTA
GAACATTTCCAAAAAGCGGCGAAAGTAAGCAGAGAGAAAGTGCCTGATCTGCTTCCGAAAGTCTTGTTTGGATTAAGCTG
GACATTATGTAAAGCGGGCCAAACACAGAAGGCGTTTCAGTTCATAGAGGAAGGATTAGACCATATCACAGCACGTTCTC
ACAAATTTTATAAAGAATTGTTTCTGTTCTTGCAGGCCGTGTACAAGGAGACTGTTGACGAACGAAAAATTCATGATCTT
TTAAGCTATTTCGAAAAAAAGAACCTGCACGCTTACATTGAAGCATGTGCCCGGAGTGCTGCCGCTGTTTTTGAAAGCAG
CTGTCACTTTGAACAAGCCGCTGCGTTTTATCGGAAAGTGCTGAAAGCCCAAGAAGATATTCTAAAAGGAGAGTGTTTAT
ATGCCTATTAA
TTGAGTCAAGCCATACCGTCTTCGCGTGTAGGTGTTAAGATTAATGAATGGTATAAAATGATTCGCCAGTTCAGTGTTCC
GGATGCTGAGATTCTGAAAGCGGAGGTTGAGCAGGACATTCAGCAGATGGAAGAAGACCAGGATTTGCTGATCTATTATT
CTCTGATGTGTTTTCGGCACCAGCTGATGCTTGATTATTTGGAGCCGGGACAAACATACGGGAATCGCCCTACAGTGACA
GAGCTTCTTGAAACGATTGAGACCCCTCAGAAAAAACTCACAGGCCTTTTGAAATACTACTCTTTGTTTTTCCGCGGCAT
GTATGAATTTGATCAAAAAGAATATGTGGAAGCGATCGGGTATTATCGCGAGGCGGAGAAAGAACTGCCGTTTGTGTCAG
ATGAAATTGAGAAAGCGGAATTCCATTTTAAAGTGGCCGAAGCGTATTATCACATGAAGCAAACCCATGTGTCGATGCAT
CATATTCTTCAAGCTTTAGACATTTATCAAAACAATCCCCTATACAGCATTAGAACGATACAAAGCTTGTTTGTGATCGC
TGGCAACTATGATGATTTCAAACATTATGATAAAGCGCTCCCGCATTTAGAGACGGCGCTGGAATTGGCAATGGACATTC
AAAATGACAGGTTTATCGCCATTTCTCTATTGAACATCGCGAACAGCTATGACAGATCAGGAGACGATCAGATGGCTGTA
GAACATTTCCAAAAAGCGGCGAAAGTAAGCAGAGAGAAAGTGCCTGATCTGCTTCCGAAAGTCTTGTTTGGATTAAGCTG
GACATTATGTAAAGCGGGCCAAACACAGAAGGCGTTTCAGTTCATAGAGGAAGGATTAGACCATATCACAGCACGTTCTC
ACAAATTTTATAAAGAATTGTTTCTGTTCTTGCAGGCCGTGTACAAGGAGACTGTTGACGAACGAAAAATTCATGATCTT
TTAAGCTATTTCGAAAAAAAGAACCTGCACGCTTACATTGAAGCATGTGCCCGGAGTGCTGCCGCTGTTTTTGAAAGCAG
CTGTCACTTTGAACAAGCCGCTGCGTTTTATCGGAAAGTGCTGAAAGCCCAAGAAGATATTCTAAAAGGAGAGTGTTTAT
ATGCCTATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rapC | Bacillus subtilis subsp. subtilis str. 168 |
40.691 |
100 |
0.407 |
| rapF | Bacillus subtilis subsp. subtilis str. 168 |
39.788 |
100 |
0.399 |