Detailed information NTG0300481

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: ETL58_RS04095
• Genome accession: NZ_CP035413
• Coordinates: 766666..767793 (-)
• Length: 375 a.a.
• NCBI ID: WP_029317423.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain SRCM103629
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 761666..772793

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ETL58_RS21720	-	761738..762130 (-)	393	WP_080265325.1	recombinase family protein	-
ETL58_RS04080 (ETL58_04080)	-	762591..762800 (-)	210	WP_014479083.1	hypothetical protein	-
ETL58_RS04085 (ETL58_04085)	-	763033..766050 (+)	3018	WP_029317421.1	SIR2 family protein	-
ETL58_RS04090 (ETL58_04090)	-	766479..766676 (-)	198	WP_029317422.1	hypothetical protein	-
ETL58_RS04095 (ETL58_04095)	rapC	766666..767793 (-)	1128	WP_029317423.1	Rap family tetratricopeptide repeat protein	Regulator
ETL58_RS04100 (ETL58_04100)	-	767983..768285 (-)	303	WP_029317424.1	hypothetical protein	-
ETL58_RS04105 (ETL58_04105)	-	768369..768764 (-)	396	WP_029317425.1	immunity 22 family protein	-
ETL58_RS04110 (ETL58_04110)	-	768777..770663 (-)	1887	WP_029317426.1	T7SS effector LXG polymorphic toxin	-
ETL58_RS04115 (ETL58_04115)	-	770876..771892 (+)	1017	WP_029317427.1	hypothetical protein	-

Sequence

Protein

• Length: 375 a.a.
• Molecular weight: 44294.99 Da
• Isoelectric Point: 6.9584

>NTDB_id=300481 ETL58_RS04095 WP_029317423.1 766666..767793(-) (rapC) [Bacillus subtilis strain SRCM103629]
MGTISSPHVGMKINEWNRHIQKFNVTDAELLKAEIERDIDVMEEDQDLLIYYQLIAFRHQLMIDYVIPSEGNQMKLSEYL
KRIEGSNRKMEKLVEYYYYFFQGMYEFKEGNFLSAITFYQKAENTIPYISDEIERAEFYFKMAEVFYHMKQTHVSMHYSS
QAYNIYKTHDLYSVRRIQCHFVIAGNYDDLESHEKALPHLEQALKGARLLESKNKRIYGQALFNIGNCYLKMGELTKAAK
YMEQSILQFKKSNFNNLTQAYHDLALIYFLQHKQDQAMDCFRKGVRFACKFDDGLFKIMFEGLQALFVKKGEASILLNVF
NKLETSQGYPYMEELALLAAKFYTEIGQMDDSVICFKKMVHARKQIQRGDCLYEI

Nucleotide

• Length: 1128 bp

>NTDB_id=300481 ETL58_RS04095 WP_029317423.1 766666..767793(-) (rapC) [Bacillus subtilis strain SRCM103629]
TTGGGCACGATTTCGTCTCCGCACGTTGGGATGAAAATTAATGAGTGGAACCGGCATATTCAAAAGTTTAATGTGACTGA
CGCTGAATTGCTTAAAGCTGAGATTGAGCGGGACATTGACGTCATGGAAGAAGACCAAGACCTCTTGATTTACTATCAGC
TCATTGCATTTCGCCATCAGCTTATGATTGACTATGTGATTCCATCTGAAGGAAACCAAATGAAGTTATCAGAATATTTA
AAGAGAATTGAAGGCAGCAACAGGAAGATGGAGAAGCTCGTTGAATACTACTATTACTTTTTTCAAGGAATGTATGAATT
CAAAGAGGGCAATTTCTTAAGTGCCATTACATTCTATCAAAAAGCGGAAAATACAATTCCTTATATTTCAGATGAAATCG
AGCGGGCAGAATTTTATTTTAAAATGGCTGAAGTGTTTTATCATATGAAACAAACCCATGTATCCATGCACTATTCTTCT
CAGGCGTATAACATTTATAAAACGCACGACCTTTACTCAGTCCGCCGCATACAATGCCATTTTGTGATCGCAGGAAACTA
CGATGACCTAGAAAGTCATGAAAAGGCGCTCCCTCACCTCGAACAGGCACTAAAAGGCGCACGGCTGCTTGAAAGCAAAA
ACAAGCGAATTTACGGCCAAGCTTTATTCAATATCGGAAATTGTTATCTTAAAATGGGCGAATTGACGAAAGCAGCAAAA
TACATGGAGCAATCGATACTCCAATTCAAAAAATCAAATTTCAACAACTTGACACAAGCTTACCACGATTTAGCCTTAAT
TTATTTTCTTCAACATAAACAAGACCAAGCAATGGATTGTTTCAGAAAAGGCGTACGCTTCGCATGTAAATTCGACGATG
GCCTATTTAAAATTATGTTTGAAGGATTACAGGCGCTGTTTGTCAAAAAAGGAGAAGCGTCCATTTTATTAAATGTTTTC
AACAAATTAGAGACATCCCAAGGATATCCTTATATGGAAGAGTTGGCATTATTAGCCGCAAAGTTTTATACTGAAATTGG
GCAGATGGATGATTCTGTTATCTGTTTCAAAAAGATGGTTCATGCCCGCAAACAAATTCAGAGAGGGGATTGTTTGTATG
AAATTTAA

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (3-64)

• Tetratricopeptide repeat (TPR_12) (221-287)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	41.689	100	0.421
rapF	Bacillus subtilis subsp. subtilis str. 168	39.05	100	0.395