Detailed information NTG0296789

Bioinformatically predicted

Overview

• Name: comR
• Type: Regulator
• Locus tag: EQH26_RS00585
• Genome accession: NZ_CP035254
• Coordinates: 93469..94362 (+)
• Length: 297 a.a.
• NCBI ID: WP_000343891.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain TVO_1901932
• Function: activate transcription of comX (predicted from homology) Competence regulation

Genomic Context

Location: 88469..99362

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EQH26_RS00550 (EQH26_00560)	-	88782..89951 (+)	1170	WP_000366345.1	pyridoxal phosphate-dependent aminotransferase	-
EQH26_RS00555 (EQH26_00565)	recO	89948..90718 (+)	771	WP_000616162.1	DNA repair protein RecO	Machinery gene
EQH26_RS00560 (EQH26_00570)	plsX	90715..91707 (+)	993	WP_000717456.1	phosphate acyltransferase PlsX	-
EQH26_RS00565 (EQH26_00575)	-	91713..91946 (+)	234	WP_000136447.1	acyl carrier protein	-
EQH26_RS00570 (EQH26_00580)	-	91983..92282 (+)	300	Protein_108	transposase family protein	-
EQH26_RS00575 (EQH26_00585)	blpU	92485..92715 (+)	231	WP_001093487.1	bacteriocin-like peptide BlpU	-
EQH26_RS10810	-	92718..92843 (+)	126	WP_000346297.1	PncF family bacteriocin immunity protein	-
EQH26_RS00580 (EQH26_00590)	-	93254..93448 (+)	195	WP_000756776.1	hypothetical protein	-
EQH26_RS00585 (EQH26_00595)	comR	93469..94362 (+)	894	WP_000343891.1	XRE family transcriptional regulator	Regulator
EQH26_RS00590 (EQH26_00600)	-	94905..95201 (+)	297	WP_000837726.1	uberolysin/carnocyclin family circular bacteriocin	-
EQH26_RS00595 (EQH26_00605)	-	95208..96344 (+)	1137	WP_000698828.1	hypothetical protein	-
EQH26_RS00600 (EQH26_00610)	-	96341..96823 (+)	483	WP_001232094.1	stage II sporulation protein M	-
EQH26_RS00605 (EQH26_00615)	-	96820..97416 (+)	597	WP_000687787.1	ATP-binding cassette domain-containing protein	-
EQH26_RS00610 (EQH26_00620)	-	97397..97888 (+)	492	WP_000671990.1	hypothetical protein	-

Sequence

Protein

• Length: 297 a.a.
• Molecular weight: 34476.90 Da
• Isoelectric Point: 4.6063

>NTDB_id=296789 EQH26_RS00585 WP_000343891.1 93469..94362(+) (comR) [Streptococcus pneumoniae strain TVO_1901932]
MDELKREIGYKIKTIRRSCGKTQIDICGDESELTIRQLARIENGQALATLPKLLLIADKLGVSLQNIVDVKVIEIPKGFL
KLKDELIHSQTYADKGRIERKEAILEEIYENYYENLPEEEQLIVDVTQARFDIYGSSDVTYGLGLVEEYFQQLLKKKYFS
VNDLLIIELYFFCCAMGLEDKEHFEELAQKVLLCSEYEDKDSLVQMEKVLLSLFIQIQTEDSLIYIQTFEKIIAKTRHVF
YRPHLFLLKAKYALFVDKNVAEAESFYEKAISLAELLDDQVLVQKILAEKQIDFPTT

Nucleotide

• Length: 894 bp

>NTDB_id=296789 EQH26_RS00585 WP_000343891.1 93469..94362(+) (comR) [Streptococcus pneumoniae strain TVO_1901932]
ATGGATGAGTTGAAACGTGAAATTGGTTATAAAATCAAAACTATTAGGCGATCTTGTGGAAAAACTCAGATAGATATTTG
TGGTGATGAATCAGAGTTGACGATTCGTCAGCTAGCACGTATTGAAAATGGGCAAGCTTTAGCAACACTTCCTAAATTAT
TATTGATTGCGGATAAACTTGGAGTATCATTACAGAATATTGTGGATGTTAAGGTTATAGAGATTCCAAAAGGATTCCTA
AAACTCAAAGATGAGCTGATTCATTCTCAAACCTACGCTGATAAGGGAAGAATCGAACGAAAAGAAGCTATACTTGAGGA
AATATATGAAAACTATTATGAGAATTTGCCTGAGGAAGAGCAGTTAATTGTGGATGTGACACAAGCTCGTTTTGATATTT
ATGGTAGTTCAGATGTGACCTACGGTTTAGGGTTAGTGGAAGAATATTTCCAGCAGTTATTAAAAAAGAAATATTTTTCT
GTAAATGATTTGTTGATTATTGAATTGTATTTCTTTTGTTGTGCTATGGGATTAGAAGATAAAGAACATTTTGAGGAGTT
AGCTCAAAAAGTATTGCTATGTTCAGAATATGAAGATAAGGATAGCCTAGTTCAGATGGAAAAAGTTCTTCTGAGCCTAT
TTATCCAAATTCAGACAGAAGATAGTCTGATATATATTCAAACATTTGAGAAAATTATTGCTAAAACAAGACATGTTTTT
TACCGACCTCATCTATTTTTGTTAAAGGCGAAATATGCTTTATTTGTAGATAAGAATGTGGCAGAGGCAGAAAGTTTCTA
TGAAAAGGCGATTTCTCTAGCAGAATTGCTAGATGATCAGGTATTAGTTCAGAAAATTTTAGCAGAAAAACAAATAGATT
TCCCAACAACCTGA

Domains

Predicted by InterProScan.

• ComR tetratricopeptide (ComR_TPR) (76-290)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR	Streptococcus mutans UA159	37	100	0.374