Detailed information
Bioinformatically predicted
Overview
| Name | comGC | Type | Machinery gene |
| Locus tag | CSC57_RS00865 | Genome accession | NZ_CP029649 |
| Coordinates | 167162..167473 (+) | Length | 103 a.a. |
| NCBI ID | WP_000472256.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain AR_0472 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 162162..172473
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CSC57_RS00835 (CSC57_0155) | - | 162945..163148 (+) | 204 | WP_000087561.1 | YqgQ family protein | - |
| CSC57_RS00840 (CSC57_0156) | - | 163145..164131 (+) | 987 | WP_000161314.1 | ROK family glucokinase | - |
| CSC57_RS00845 (CSC57_0157) | - | 164131..164460 (+) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| CSC57_RS00850 (CSC57_0158) | - | 164457..165080 (+) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| CSC57_RS00855 (CSC57_0159) | comGA | 165132..166106 (+) | 975 | WP_000697220.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| CSC57_RS00860 (CSC57_0160) | comGB | 166078..167148 (+) | 1071 | WP_000776401.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| CSC57_RS00865 (CSC57_0161) | comGC | 167162..167473 (+) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| CSC57_RS00870 (CSC57_0162) | comGD | 167451..167897 (+) | 447 | WP_001788899.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| CSC57_RS00875 (CSC57_0163) | comGE | 167884..168183 (+) | 300 | WP_000844410.1 | hypothetical protein | Machinery gene |
| CSC57_RS00880 (CSC57_0164) | comGF | 168101..168598 (+) | 498 | WP_020978197.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| CSC57_RS00885 | - | 168695..168841 (+) | 147 | WP_001789879.1 | hypothetical protein | - |
| CSC57_RS00890 (CSC57_0165) | - | 168831..169355 (+) | 525 | WP_001015121.1 | shikimate kinase | - |
| CSC57_RS00895 (CSC57_0166) | gcvT | 169514..170605 (+) | 1092 | WP_000093349.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| CSC57_RS00900 (CSC57_0167) | gcvPA | 170625..171971 (+) | 1347 | WP_000019681.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
Sequence
Protein
Download Length: 103 a.a. Molecular weight: 11315.36 Da Isoelectric Point: 8.5268
>NTDB_id=294492 CSC57_RS00865 WP_000472256.1 167162..167473(+) (comGC) [Staphylococcus aureus strain AR_0472]
MFKFLKKTQAFTLIEMLLVLLIISLLLILIIPNIAKQTAHIQSTGCNAQVKMVNSQIEAYALKHNRNPSSIEDLIADGFI
KEAQKTCKSGETITISNGEAVAN
MFKFLKKTQAFTLIEMLLVLLIISLLLILIIPNIAKQTAHIQSTGCNAQVKMVNSQIEAYALKHNRNPSSIEDLIADGFI
KEAQKTCKSGETITISNGEAVAN
Nucleotide
Download Length: 312 bp
>NTDB_id=294492 CSC57_RS00865 WP_000472256.1 167162..167473(+) (comGC) [Staphylococcus aureus strain AR_0472]
ATGTTTAAATTTCTTAAGAAAACTCAAGCGTTTACATTGATAGAGATGCTATTAGTGTTATTAATCATCAGTTTATTATT
AATTTTAATCATTCCAAATATTGCTAAACAAACTGCTCACATACAATCAACAGGTTGTAATGCACAGGTAAAAATGGTTA
ATAGTCAAATTGAAGCGTATGCATTGAAACATAATAGAAATCCATCGTCTATTGAAGACTTAATTGCAGATGGTTTTATA
AAAGAAGCACAAAAGACATGTAAATCAGGAGAGACAATAACAATTAGTAATGGAGAAGCAGTTGCAAATTAG
ATGTTTAAATTTCTTAAGAAAACTCAAGCGTTTACATTGATAGAGATGCTATTAGTGTTATTAATCATCAGTTTATTATT
AATTTTAATCATTCCAAATATTGCTAAACAAACTGCTCACATACAATCAACAGGTTGTAATGCACAGGTAAAAATGGTTA
ATAGTCAAATTGAAGCGTATGCATTGAAACATAATAGAAATCCATCGTCTATTGAAGACTTAATTGCAGATGGTTTTATA
AAAGAAGCACAAAAGACATGTAAATCAGGAGAGACAATAACAATTAGTAATGGAGAAGCAGTTGCAAATTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGC | Staphylococcus aureus MW2 |
100 |
100 |
1 |
| comGC | Staphylococcus aureus N315 |
100 |
100 |
1 |
| comGC/cglC | Streptococcus pneumoniae TIGR4 |
46.078 |
99.029 |
0.456 |
| comGC/cglC | Streptococcus pneumoniae Rx1 |
46.078 |
99.029 |
0.456 |
| comGC/cglC | Streptococcus pneumoniae D39 |
46.078 |
99.029 |
0.456 |
| comGC/cglC | Streptococcus pneumoniae R6 |
46.078 |
99.029 |
0.456 |
| comGC/cglC | Streptococcus mitis SK321 |
51.163 |
83.495 |
0.427 |
| comGC/cglC | Streptococcus mitis NCTC 12261 |
51.163 |
83.495 |
0.427 |
| comYC | Streptococcus gordonii str. Challis substr. CH1 |
42.857 |
95.146 |
0.408 |
| comYC | Streptococcus suis isolate S10 |
50 |
75.728 |
0.379 |
| comGC | Bacillus subtilis subsp. subtilis str. 168 |
41.758 |
88.35 |
0.369 |
| comGC | Lactococcus lactis subsp. cremoris KW2 |
46.341 |
79.612 |
0.369 |