Detailed information
Bioinformatically predicted
Overview
| Name | pilR | Type | Regulator |
| Locus tag | DLK06_RS19370 | Genome accession | NZ_CP029610 |
| Coordinates | 3943599..3945011 (+) | Length | 470 a.a. |
| NCBI ID | WP_032005832.1 | Uniprot ID | A0A010JV14 |
| Organism | Acinetobacter pittii strain ST220 | ||
| Function | regulation of type IV pilus assembly (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3938599..3950011
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DLK06_RS19350 (DLK06_19370) | thrC | 3938854..3939993 (+) | 1140 | WP_002048893.1 | threonine synthase | - |
| DLK06_RS19355 (DLK06_19375) | pbpG | 3940101..3941147 (-) | 1047 | WP_005065720.1 | D-alanyl-D-alanine endopeptidase PBP7/8 | - |
| DLK06_RS19360 (DLK06_19380) | gacA | 3941360..3941995 (+) | 636 | WP_002121174.1 | response regulator | - |
| DLK06_RS19365 (DLK06_19385) | pilS | 3942006..3943574 (+) | 1569 | WP_005065716.1 | sensor histidine kinase | Regulator |
| DLK06_RS19370 (DLK06_19390) | pilR | 3943599..3945011 (+) | 1413 | WP_032005832.1 | sigma-54-dependent transcriptional regulator | Regulator |
| DLK06_RS19375 (DLK06_19395) | ctpA | 3945015..3946199 (-) | 1185 | WP_002121269.1 | S41 family peptidase | - |
| DLK06_RS19380 (DLK06_19400) | gpmI | 3946215..3947762 (-) | 1548 | WP_005065710.1 | 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | - |
| DLK06_RS19385 (DLK06_19405) | lptG | 3947889..3948959 (-) | 1071 | WP_002121203.1 | LPS export ABC transporter permease LptG | - |
Sequence
Protein
Download Length: 470 a.a. Molecular weight: 52590.61 Da Isoelectric Point: 6.3452
>NTDB_id=294210 DLK06_RS19370 WP_032005832.1 3943599..3945011(+) (pilR) [Acinetobacter pittii strain ST220]
MAEQQPLVLLVDDEEDLCLLMQMTLARMGIKTHLAYRVEQAKQLFTQFHYDACLTDLNLPDGSGLELVQHVSQTYPHTPI
AVLTAYGNMDIAIAALKAGAFDFVSKPINQIHLDQLLKKALNQPKPEHEFGETTLENDLLIGRSPPIQNLRTAIKKIARS
QAPVFVTGESGTGKEVVANLIHRLSNRSEGPFIAINCGAIPTELMESELFGHKKGSFTGATQDKQGLILSAHGGSLFLDE
IAELPLSMQVKLLRAVQEKKIRPVGSDQEIDVDFRVISASHQDLDLLVQQGKFRQDLFFRIHVMDIMLPPLRDRGGDILL
LANHFIQKVCTEWGVSSKQLTASAETYLLQQDFPGNVRELRNMIERAITLSDDEPIDLTHLAPPPRGSSVSPQIVTKQLN
QTPAVQTHPKFPMEGLERYLENIEKDILLNALNMTHWNRTLAAKKLGMTFRSLRYRLKKFGLDTEMGEEV
MAEQQPLVLLVDDEEDLCLLMQMTLARMGIKTHLAYRVEQAKQLFTQFHYDACLTDLNLPDGSGLELVQHVSQTYPHTPI
AVLTAYGNMDIAIAALKAGAFDFVSKPINQIHLDQLLKKALNQPKPEHEFGETTLENDLLIGRSPPIQNLRTAIKKIARS
QAPVFVTGESGTGKEVVANLIHRLSNRSEGPFIAINCGAIPTELMESELFGHKKGSFTGATQDKQGLILSAHGGSLFLDE
IAELPLSMQVKLLRAVQEKKIRPVGSDQEIDVDFRVISASHQDLDLLVQQGKFRQDLFFRIHVMDIMLPPLRDRGGDILL
LANHFIQKVCTEWGVSSKQLTASAETYLLQQDFPGNVRELRNMIERAITLSDDEPIDLTHLAPPPRGSSVSPQIVTKQLN
QTPAVQTHPKFPMEGLERYLENIEKDILLNALNMTHWNRTLAAKKLGMTFRSLRYRLKKFGLDTEMGEEV
Nucleotide
Download Length: 1413 bp
>NTDB_id=294210 DLK06_RS19370 WP_032005832.1 3943599..3945011(+) (pilR) [Acinetobacter pittii strain ST220]
ATGGCAGAACAGCAACCACTCGTTTTGCTTGTAGACGATGAAGAAGATTTGTGCCTGTTAATGCAAATGACTCTTGCACG
AATGGGGATTAAGACACATCTTGCTTATCGGGTTGAACAGGCCAAACAGCTCTTTACTCAGTTTCATTACGATGCGTGCT
TGACCGATTTAAATCTACCTGATGGTAGTGGTTTAGAATTGGTTCAACATGTTTCTCAAACTTACCCACACACACCCATT
GCAGTCTTAACTGCATACGGCAATATGGATATTGCAATTGCAGCACTAAAAGCGGGAGCTTTTGATTTTGTCAGCAAACC
GATTAACCAAATTCATTTAGATCAATTGTTAAAAAAGGCGCTTAACCAGCCAAAACCAGAGCATGAGTTCGGTGAAACAA
CATTAGAAAATGACTTATTAATTGGGCGTTCACCACCTATACAAAACTTACGGACAGCTATTAAAAAAATAGCCCGCTCC
CAAGCTCCTGTATTTGTTACAGGCGAGTCTGGTACGGGTAAAGAAGTTGTTGCGAATCTGATTCACCGATTAAGCAACCG
CAGTGAAGGACCATTTATTGCAATTAACTGTGGAGCAATCCCAACTGAGCTCATGGAAAGTGAACTTTTCGGGCATAAAA
AAGGGAGCTTTACTGGCGCGACTCAAGACAAACAAGGTCTGATTTTATCGGCACACGGCGGCAGTTTATTTTTAGATGAA
ATTGCCGAATTGCCTTTAAGTATGCAAGTTAAATTGCTTCGGGCAGTACAAGAGAAAAAGATTCGCCCTGTAGGTTCAGA
TCAGGAAATTGATGTCGATTTTCGAGTAATCAGTGCCAGTCACCAAGACTTAGATTTATTAGTTCAACAAGGTAAATTCC
GTCAGGACTTATTTTTCCGTATTCATGTTATGGATATTATGTTGCCGCCACTACGTGACCGTGGTGGAGATATTTTGCTA
TTGGCCAATCATTTTATTCAAAAGGTTTGTACGGAATGGGGAGTTTCAAGCAAGCAATTAACGGCGAGCGCTGAAACTTA
CTTATTGCAGCAAGACTTTCCGGGTAATGTTCGTGAATTAAGAAATATGATTGAGCGAGCTATTACTTTAAGTGATGATG
AGCCCATTGATTTAACACACTTAGCACCTCCTCCTAGAGGCAGTAGCGTGAGCCCGCAAATCGTAACGAAACAACTAAAT
CAAACACCGGCTGTTCAGACTCACCCAAAATTTCCAATGGAAGGTTTAGAACGCTACTTAGAAAATATCGAAAAAGATAT
TTTACTGAATGCGCTAAATATGACTCATTGGAATCGAACTTTGGCAGCTAAAAAGCTAGGAATGACATTCCGTTCTTTGC
GCTATCGGCTCAAAAAGTTTGGCTTAGATACTGAAATGGGAGAGGAAGTATAA
ATGGCAGAACAGCAACCACTCGTTTTGCTTGTAGACGATGAAGAAGATTTGTGCCTGTTAATGCAAATGACTCTTGCACG
AATGGGGATTAAGACACATCTTGCTTATCGGGTTGAACAGGCCAAACAGCTCTTTACTCAGTTTCATTACGATGCGTGCT
TGACCGATTTAAATCTACCTGATGGTAGTGGTTTAGAATTGGTTCAACATGTTTCTCAAACTTACCCACACACACCCATT
GCAGTCTTAACTGCATACGGCAATATGGATATTGCAATTGCAGCACTAAAAGCGGGAGCTTTTGATTTTGTCAGCAAACC
GATTAACCAAATTCATTTAGATCAATTGTTAAAAAAGGCGCTTAACCAGCCAAAACCAGAGCATGAGTTCGGTGAAACAA
CATTAGAAAATGACTTATTAATTGGGCGTTCACCACCTATACAAAACTTACGGACAGCTATTAAAAAAATAGCCCGCTCC
CAAGCTCCTGTATTTGTTACAGGCGAGTCTGGTACGGGTAAAGAAGTTGTTGCGAATCTGATTCACCGATTAAGCAACCG
CAGTGAAGGACCATTTATTGCAATTAACTGTGGAGCAATCCCAACTGAGCTCATGGAAAGTGAACTTTTCGGGCATAAAA
AAGGGAGCTTTACTGGCGCGACTCAAGACAAACAAGGTCTGATTTTATCGGCACACGGCGGCAGTTTATTTTTAGATGAA
ATTGCCGAATTGCCTTTAAGTATGCAAGTTAAATTGCTTCGGGCAGTACAAGAGAAAAAGATTCGCCCTGTAGGTTCAGA
TCAGGAAATTGATGTCGATTTTCGAGTAATCAGTGCCAGTCACCAAGACTTAGATTTATTAGTTCAACAAGGTAAATTCC
GTCAGGACTTATTTTTCCGTATTCATGTTATGGATATTATGTTGCCGCCACTACGTGACCGTGGTGGAGATATTTTGCTA
TTGGCCAATCATTTTATTCAAAAGGTTTGTACGGAATGGGGAGTTTCAAGCAAGCAATTAACGGCGAGCGCTGAAACTTA
CTTATTGCAGCAAGACTTTCCGGGTAATGTTCGTGAATTAAGAAATATGATTGAGCGAGCTATTACTTTAAGTGATGATG
AGCCCATTGATTTAACACACTTAGCACCTCCTCCTAGAGGCAGTAGCGTGAGCCCGCAAATCGTAACGAAACAACTAAAT
CAAACACCGGCTGTTCAGACTCACCCAAAATTTCCAATGGAAGGTTTAGAACGCTACTTAGAAAATATCGAAAAAGATAT
TTTACTGAATGCGCTAAATATGACTCATTGGAATCGAACTTTGGCAGCTAAAAAGCTAGGAATGACATTCCGTTCTTTGC
GCTATCGGCTCAAAAAGTTTGGCTTAGATACTGAAATGGGAGAGGAAGTATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilR | Acinetobacter baumannii strain A118 |
85.835 |
100 |
0.864 |
| pilR | Pseudomonas aeruginosa PAK |
51.198 |
97.66 |
0.5 |