Detailed information NTG0290158

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: EJ992_RS12540
• Genome accession: NZ_CP034569
• Coordinates: 2429428..2430558 (-)
• Length: 376 a.a.
• NCBI ID: WP_009327959.1
• Uniprot ID: Q65HV9
• Organism: Bacillus licheniformis strain ATCC 14580
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 2424428..2435558

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EJ992_RS12520 (EJ992_12520)	-	2425617..2425961 (-)	345	WP_003183123.1	hypothetical protein	-
EJ992_RS12525 (EJ992_12525)	-	2426224..2428410 (-)	2187	WP_011198084.1	RNA ligase	-
EJ992_RS12530 (EJ992_12530)	-	2428537..2428974 (-)	438	WP_011198085.1	Hsp20/alpha crystallin family protein	-
EJ992_RS12535 (EJ992_12535)	-	2429133..2429438 (-)	306	WP_003183128.1	hypothetical protein	-
EJ992_RS12540 (EJ992_12540)	rapC	2429428..2430558 (-)	1131	WP_009327959.1	Rap family tetratricopeptide repeat protein	Regulator
EJ992_RS12545 (EJ992_12545)	-	2430789..2431226 (-)	438	WP_003183133.1	peptidylprolyl isomerase	-
EJ992_RS12550 (EJ992_12550)	-	2431356..2432459 (+)	1104	WP_003183136.1	DUF1002 domain-containing protein	-
EJ992_RS12555 (EJ992_12555)	-	2432575..2433737 (+)	1163	WP_085959889.1	IS3 family transposase	-
EJ992_RS12560 (EJ992_12560)	-	2433772..2434605 (-)	834	WP_011198087.1	poly-gamma-glutamate hydrolase family protein	-

Sequence

Protein

• Length: 376 a.a.
• Molecular weight: 44264.11 Da
• Isoelectric Point: 4.7199

>NTDB_id=290158 EJ992_RS12540 WP_009327959.1 2429428..2430558(-) (rapC) [Bacillus licheniformis strain ATCC 14580]
MSVKIPSTAVGVKINDWYNAIRKFNVTDAEMLKAEIEREISQMEEDQDLLLYYALMEFRHRIMLDYVKPLEEGETPPDFS
EILKDIEDEQGKLTGLLEYYFNFFRGMYEYKNHDYIKAISFYRRAEKKLLHVEDEIERAEFHFKMAEVFYHMKQSHVSMN
YALQAIETYQAHETYTVRRIQCEFVIAGNYDDLESNEKALSHLEKALKLSQQEGQLILEGHTYYNLGNCYYKMGDFDQAA
EYFNRAAAIYQEESSDILPKAFFSLALAYFKLKQLEKADDALNKGIDIARRSDDAIYLSKFHFLKALYVDDDGRAPMLET
FQLLGSKKMYPDIEDLALEAAEYYNEIGRLSDSVYFYQTVFSARKQMKKGDWSYEI

Nucleotide

• Length: 1131 bp

>NTDB_id=290158 EJ992_RS12540 WP_009327959.1 2429428..2430558(-) (rapC) [Bacillus licheniformis strain ATCC 14580]
GTGAGCGTAAAAATCCCATCGACGGCAGTCGGCGTAAAAATTAATGACTGGTATAACGCGATACGTAAATTCAACGTCAC
GGACGCCGAAATGCTGAAGGCAGAAATTGAGCGCGAAATTTCTCAAATGGAAGAGGATCAAGACTTATTATTGTATTACG
CCTTAATGGAATTCAGACACAGAATCATGCTTGATTACGTAAAACCTTTGGAAGAAGGCGAAACCCCGCCTGACTTTTCT
GAAATATTAAAAGATATCGAAGATGAACAAGGAAAGCTGACAGGCCTGCTCGAATATTATTTTAACTTTTTTAGAGGGAT
GTATGAATATAAAAACCATGATTATATTAAAGCGATCTCTTTTTACAGGCGCGCCGAAAAAAAGCTGCTGCACGTCGAGG
ACGAAATAGAGAGAGCCGAGTTTCATTTTAAAATGGCTGAAGTGTTTTATCATATGAAACAGAGCCATGTGTCGATGAAC
TATGCGCTTCAAGCGATTGAAACCTATCAGGCGCATGAAACCTACACGGTTCGGAGAATCCAATGCGAGTTCGTCATCGC
AGGGAACTATGACGATTTAGAGTCGAATGAAAAAGCGCTGTCACATCTTGAAAAGGCGCTGAAGCTTTCACAGCAAGAAG
GCCAGCTCATATTGGAAGGACACACCTATTACAATTTGGGAAACTGCTATTATAAGATGGGGGATTTCGATCAGGCAGCC
GAGTACTTCAACAGGGCTGCTGCGATTTATCAAGAAGAGTCATCAGATATTCTTCCAAAAGCGTTTTTCAGTCTTGCACT
TGCATATTTCAAGTTGAAGCAGCTGGAAAAGGCGGATGACGCGTTAAACAAAGGAATTGACATCGCCCGCCGATCAGACG
ATGCGATCTACCTTTCAAAATTTCATTTTTTAAAAGCTTTGTATGTTGATGATGACGGCAGGGCTCCAATGCTGGAGACA
TTTCAGCTGCTCGGGTCAAAAAAGATGTATCCCGATATTGAGGACTTGGCATTGGAAGCAGCTGAATACTATAATGAAAT
TGGGCGCTTGAGCGACTCTGTTTATTTCTATCAAACGGTATTCAGTGCTCGAAAACAAATGAAAAAAGGGGACTGGTCGT
ATGAAATCTAA

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_8) (260-290)

• Tetratricopeptide repeat (TPR_12) (190-252)

3D structure

• AlphaFold DB: Q65HV9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	47.745	100	0.479
rapF	Bacillus subtilis subsp. subtilis str. 168	44.619	100	0.452