Detailed information NTG0290102

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: EJ992_RS05400
• Genome accession: NZ_CP034569
• Coordinates: 1081803..1082921 (+)
• Length: 372 a.a.
• NCBI ID: WP_011197708.1
• Uniprot ID: Q65LU3
• Organism: Bacillus licheniformis strain ATCC 14580
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 1076803..1087921

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EJ992_RS05375 (EJ992_05375)	-	1077450..1077803 (+)	354	WP_003180211.1	YlbF family regulator	-
EJ992_RS05385 (EJ992_05385)	-	1078250..1079113 (+)	864	WP_011197705.1	Cof-type HAD-IIB family hydrolase	-
EJ992_RS05390 (EJ992_05390)	-	1079256..1080764 (+)	1509	WP_011197706.1	coproporphyrinogen III oxidase	-
EJ992_RS05395 (EJ992_05395)	-	1080900..1081676 (+)	777	WP_011197707.1	enoyl-CoA hydratase	-
EJ992_RS05400 (EJ992_05400)	rapC	1081803..1082921 (+)	1119	WP_011197708.1	Rap family tetratricopeptide repeat protein	Regulator
EJ992_RS21950	-	1082911..1083048 (+)	138	WP_016886158.1	hypothetical protein	-
EJ992_RS05405 (EJ992_05405)	-	1083053..1083331 (+)	279	WP_003180226.1	hypothetical protein	-
EJ992_RS05410 (EJ992_05410)	-	1083406..1083591 (-)	186	WP_003180228.1	YhzD family protein	-
EJ992_RS05415 (EJ992_05415)	-	1083709..1084605 (+)	897	WP_011197710.1	ABC transporter ATP-binding protein	-
EJ992_RS05420 (EJ992_05420)	-	1084598..1085866 (+)	1269	WP_003180232.1	ABC transporter permease	-
EJ992_RS05425 (EJ992_05425)	-	1085986..1087212 (+)	1227	WP_009328954.1	metallophosphoesterase family protein	-

Sequence

Protein

• Length: 372 a.a.
• Molecular weight: 43384.09 Da
• Isoelectric Point: 5.7199

>NTDB_id=290102 EJ992_RS05400 WP_011197708.1 1081803..1082921(+) (rapC) [Bacillus licheniformis strain ATCC 14580]
MKQKIPSEYVARKLNDWYNAIRKNQIAASESLKAEILNDFQDMEENRDVLLYYSLLEFRHKLMLSYLKPKETENIEKNLR
DLEEKEDQMTGLLNYYYWFFKGMYEFKQKRFVKAIGCYKTAEQKVSALEDEVEKAEFYYKLAEIYYYINQRYLSINYATL
ASDIFNRYETLKEKKIFCDFIIAGNWVESMTYGPALKSLANALEDARKIKNSHLTAAAHFNLGNCYFHQESYREASDHME
SALSIFEQESSSYIPKVLYNLMYVRLKQGNHAGAAACYEKGIRSAASLGDEEHAAKLNILCGLYLDGGDQKAVENGFDYL
ESNHLYAAVEELALDAAQYYNQIERLKDSIFYYEKCAQASRKIKRGDALYES

Nucleotide

• Length: 1119 bp

>NTDB_id=290102 EJ992_RS05400 WP_011197708.1 1081803..1082921(+) (rapC) [Bacillus licheniformis strain ATCC 14580]
TTGAAACAGAAGATTCCATCTGAATACGTTGCTAGAAAGCTGAATGATTGGTACAACGCCATTCGGAAAAATCAGATCGC
CGCCAGTGAATCATTGAAAGCGGAAATTTTAAATGATTTTCAAGACATGGAAGAAAATCGGGACGTCCTGCTCTACTATT
CGCTGCTTGAATTCAGGCATAAACTGATGCTCAGCTATTTGAAACCGAAAGAGACTGAAAATATTGAAAAAAACCTCCGC
GACTTAGAAGAAAAAGAAGACCAAATGACGGGTTTATTAAACTATTATTACTGGTTTTTTAAAGGGATGTATGAGTTCAA
ACAAAAGCGGTTCGTCAAAGCAATCGGCTGCTATAAAACGGCTGAACAAAAAGTCAGCGCACTGGAAGACGAGGTTGAAA
AAGCGGAATTTTATTATAAGCTTGCGGAAATCTACTATTATATCAACCAGAGATACCTGTCGATCAACTATGCGACGCTA
GCTTCCGACATTTTTAACCGGTATGAAACGCTAAAAGAAAAAAAGATTTTCTGCGATTTTATCATTGCCGGTAATTGGGT
TGAATCGATGACATACGGACCCGCGCTGAAAAGCCTGGCCAATGCGCTTGAAGACGCCAGGAAAATCAAAAACAGCCATT
TGACGGCAGCCGCTCATTTTAATTTGGGAAATTGCTATTTCCACCAAGAATCGTACCGGGAAGCCTCAGATCATATGGAG
AGCGCCCTTTCCATTTTTGAACAGGAAAGTTCATCATATATTCCCAAAGTGCTGTACAACTTGATGTACGTCCGTCTCAA
GCAGGGGAACCATGCCGGAGCTGCCGCCTGTTATGAAAAAGGCATCCGAAGCGCGGCATCGCTCGGGGATGAAGAACACG
CGGCAAAGCTTAACATTCTGTGCGGGCTGTATTTAGACGGAGGGGATCAGAAAGCCGTGGAAAACGGATTTGATTATTTG
GAGTCAAATCATTTATATGCTGCTGTTGAAGAGCTGGCTTTAGATGCAGCCCAGTATTATAATCAAATTGAGCGGCTGAA
AGATTCCATTTTTTACTATGAAAAGTGCGCTCAGGCAAGTCGAAAAATCAAAAGGGGAGATGCGTTGTATGAAAGCTAA

Domains

Predicted by InterProScan.

• Tetratricopeptide repeat (TPR_12) (195-248)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-64)

3D structure

• AlphaFold DB: Q65LU3

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	37.166	100	0.374