Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | HYN69_RS09505 | Genome accession | NZ_CP028918 |
| Coordinates | 1982216..1982764 (+) | Length | 182 a.a. |
| NCBI ID | WP_108435532.1 | Uniprot ID | A0A2S0ULP4 |
| Organism | Gemmobacter aquarius strain HYN0069 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1977216..1987764
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HYN69_RS09490 (HYN69_09490) | - | 1977966..1979123 (+) | 1158 | WP_108435529.1 | ABC transporter permease | - |
| HYN69_RS09495 (HYN69_09495) | - | 1979225..1981312 (+) | 2088 | WP_108435530.1 | ABC transporter ATP-binding protein | - |
| HYN69_RS09500 (HYN69_09500) | - | 1981422..1982027 (-) | 606 | WP_108435531.1 | lytic transglycosylase domain-containing protein | - |
| HYN69_RS09505 (HYN69_09505) | ssb | 1982216..1982764 (+) | 549 | WP_108435532.1 | single-stranded DNA-binding protein | Machinery gene |
| HYN69_RS09510 (HYN69_09510) | - | 1982863..1984176 (+) | 1314 | WP_108435533.1 | vanadium-dependent haloperoxidase | - |
| HYN69_RS09515 (HYN69_09515) | - | 1984173..1985750 (+) | 1578 | WP_108435534.1 | CRTAC1 family protein | - |
| HYN69_RS09520 (HYN69_09520) | - | 1985823..1986182 (+) | 360 | WP_108435535.1 | SUF system Fe-S cluster assembly protein | - |
| HYN69_RS09525 (HYN69_09525) | - | 1986307..1986915 (+) | 609 | WP_108435536.1 | hypothetical protein | - |
| HYN69_RS09530 (HYN69_09530) | - | 1986876..1987628 (+) | 753 | WP_159082414.1 | DUF3307 domain-containing protein | - |
Sequence
Protein
Download Length: 182 a.a. Molecular weight: 18662.22 Da Isoelectric Point: 5.3552
>NTDB_id=288539 HYN69_RS09505 WP_108435532.1 1982216..1982764(+) (ssb) [Gemmobacter aquarius strain HYN0069]
MAGSVNKVIIVGNLGRDPEVRSFPNGGKVVNLRIATSENWRDKATGERKERTEWHSVAIFNENLAKIAEQYLRKGSTVYI
EGQLETRKWQDQSGADRYTTEVVLRAFRGELTLLGGRGEGGGGGGGGGDDRGGYDDYQGGGSASGGGGARSGGGGGYGGG
SSGGGGGGGGGRANDMDDEIPF
MAGSVNKVIIVGNLGRDPEVRSFPNGGKVVNLRIATSENWRDKATGERKERTEWHSVAIFNENLAKIAEQYLRKGSTVYI
EGQLETRKWQDQSGADRYTTEVVLRAFRGELTLLGGRGEGGGGGGGGGDDRGGYDDYQGGGSASGGGGARSGGGGGYGGG
SSGGGGGGGGGRANDMDDEIPF
Nucleotide
Download Length: 549 bp
>NTDB_id=288539 HYN69_RS09505 WP_108435532.1 1982216..1982764(+) (ssb) [Gemmobacter aquarius strain HYN0069]
ATGGCAGGCTCTGTCAACAAGGTGATCATCGTCGGCAACCTCGGGCGCGACCCCGAGGTGCGGAGTTTCCCGAATGGCGG
CAAGGTGGTGAACCTGCGCATCGCCACGTCGGAAAACTGGCGCGACAAGGCGACGGGCGAGCGCAAGGAACGGACCGAAT
GGCATTCGGTGGCGATCTTCAACGAAAACCTCGCCAAGATTGCCGAGCAATATCTTCGCAAGGGATCGACTGTCTATATC
GAGGGGCAGCTCGAGACCCGTAAATGGCAGGACCAGTCGGGGGCCGACCGCTATACGACCGAAGTGGTGCTGCGGGCGTT
CCGCGGCGAGTTGACGCTGCTTGGCGGTCGCGGTGAGGGCGGCGGCGGTGGCGGCGGCGGTGGCGATGACCGCGGCGGCT
ATGACGACTATCAGGGCGGCGGCAGCGCATCGGGTGGCGGCGGTGCCCGCAGCGGTGGCGGTGGCGGCTATGGCGGCGGA
TCGTCGGGCGGTGGCGGTGGTGGTGGCGGTGGTCGCGCCAATGACATGGACGACGAAATCCCGTTCTGA
ATGGCAGGCTCTGTCAACAAGGTGATCATCGTCGGCAACCTCGGGCGCGACCCCGAGGTGCGGAGTTTCCCGAATGGCGG
CAAGGTGGTGAACCTGCGCATCGCCACGTCGGAAAACTGGCGCGACAAGGCGACGGGCGAGCGCAAGGAACGGACCGAAT
GGCATTCGGTGGCGATCTTCAACGAAAACCTCGCCAAGATTGCCGAGCAATATCTTCGCAAGGGATCGACTGTCTATATC
GAGGGGCAGCTCGAGACCCGTAAATGGCAGGACCAGTCGGGGGCCGACCGCTATACGACCGAAGTGGTGCTGCGGGCGTT
CCGCGGCGAGTTGACGCTGCTTGGCGGTCGCGGTGAGGGCGGCGGCGGTGGCGGCGGCGGTGGCGATGACCGCGGCGGCT
ATGACGACTATCAGGGCGGCGGCAGCGCATCGGGTGGCGGCGGTGCCCGCAGCGGTGGCGGTGGCGGCTATGGCGGCGGA
TCGTCGGGCGGTGGCGGTGGTGGTGGCGGTGGTCGCGCCAATGACATGGACGACGAAATCCCGTTCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Glaesserella parasuis strain SC1401 |
45.641 |
100 |
0.489 |
| ssb | Vibrio cholerae strain A1552 |
48.901 |
100 |
0.489 |
| ssb | Neisseria gonorrhoeae MS11 |
38.547 |
98.352 |
0.379 |
| ssb | Neisseria meningitidis MC58 |
38.547 |
98.352 |
0.379 |