Detailed information
Bioinformatically predicted
Overview
| Name | fimT | Type | Machinery gene |
| Locus tag | EGM95_RS03300 | Genome accession | NZ_CP033869 |
| Coordinates | 675236..675751 (-) | Length | 171 a.a. |
| NCBI ID | WP_000477151.1 | Uniprot ID | V5VA61 |
| Organism | Acinetobacter baumannii strain MRSN15313 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 670236..680751
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EGM95_RS03275 (EGM95_03275) | - | 670783..672426 (+) | 1644 | WP_000281764.1 | nitrite/sulfite reductase | - |
| EGM95_RS03280 (EGM95_03280) | - | 672419..672904 (+) | 486 | WP_000935247.1 | DUF934 domain-containing protein | - |
| EGM95_RS03285 (EGM95_03285) | - | 672986..673339 (+) | 354 | WP_000457786.1 | DMT family transporter | - |
| EGM95_RS03290 (EGM95_03290) | - | 673382..673825 (-) | 444 | WP_001176580.1 | VOC family protein | - |
| EGM95_RS03295 (EGM95_03295) | - | 673952..675127 (-) | 1176 | WP_000129964.1 | thiolase family protein | - |
| EGM95_RS03300 (EGM95_03300) | fimT | 675236..675751 (-) | 516 | WP_000477151.1 | GspH/FimT family pseudopilin | Machinery gene |
| EGM95_RS03305 (EGM95_03305) | omp38 | 676133..677203 (+) | 1071 | WP_000777880.1 | outer membrane protein Omp38 | - |
| EGM95_RS20990 | - | 677328..677471 (-) | 144 | WP_162138624.1 | hypothetical protein | - |
| EGM95_RS03315 (EGM95_03315) | - | 677490..678695 (-) | 1206 | WP_000354412.1 | RtcB family protein | - |
| EGM95_RS03320 (EGM95_03320) | - | 678972..680432 (-) | 1461 | WP_000004971.1 | amino acid permease | - |
Sequence
Protein
Download Length: 171 a.a. Molecular weight: 19606.86 Da Isoelectric Point: 8.8196
>NTDB_id=285565 EGM95_RS03300 WP_000477151.1 675236..675751(-) (fimT) [Acinetobacter baumannii strain MRSN15313]
MFKSPGFTIVELTITLVILVIMSVIAIPLYHQFMASVELKNTPRILTIHIQKAKYDAIIRHKNVVLCPSSDQLVCNTNWD
NRVISFVDNNRNLQHDLNEELLTSIDLNHHYGSMKLQRFGKKQNSIIFQGSSGLPIESNGSFIYCSYDQLKNFKLILSKM
GHVRLEELKNC
MFKSPGFTIVELTITLVILVIMSVIAIPLYHQFMASVELKNTPRILTIHIQKAKYDAIIRHKNVVLCPSSDQLVCNTNWD
NRVISFVDNNRNLQHDLNEELLTSIDLNHHYGSMKLQRFGKKQNSIIFQGSSGLPIESNGSFIYCSYDQLKNFKLILSKM
GHVRLEELKNC
Nucleotide
Download Length: 516 bp
>NTDB_id=285565 EGM95_RS03300 WP_000477151.1 675236..675751(-) (fimT) [Acinetobacter baumannii strain MRSN15313]
ATGTTTAAATCTCCTGGTTTTACTATAGTTGAGCTCACTATAACACTCGTAATTCTTGTGATTATGTCAGTTATAGCCAT
TCCTTTATACCATCAATTTATGGCATCTGTAGAACTAAAAAATACGCCGCGTATACTCACAATTCATATACAAAAAGCCA
AATATGACGCAATTATTAGGCATAAGAATGTTGTTCTTTGTCCAAGTTCTGATCAATTGGTCTGCAATACGAATTGGGAT
AACCGCGTAATCAGCTTTGTAGATAATAACCGTAATCTACAACATGATTTAAATGAAGAATTATTGACCTCTATAGATCT
TAACCATCACTACGGTTCTATGAAATTACAACGTTTTGGAAAAAAACAAAATAGTATTATTTTTCAAGGTAGTTCTGGAC
TACCCATCGAGTCGAATGGCAGTTTTATCTATTGTTCTTATGACCAGCTTAAAAACTTTAAATTAATTCTTAGCAAAATG
GGACATGTGCGCTTAGAAGAGCTTAAAAATTGTTAG
ATGTTTAAATCTCCTGGTTTTACTATAGTTGAGCTCACTATAACACTCGTAATTCTTGTGATTATGTCAGTTATAGCCAT
TCCTTTATACCATCAATTTATGGCATCTGTAGAACTAAAAAATACGCCGCGTATACTCACAATTCATATACAAAAAGCCA
AATATGACGCAATTATTAGGCATAAGAATGTTGTTCTTTGTCCAAGTTCTGATCAATTGGTCTGCAATACGAATTGGGAT
AACCGCGTAATCAGCTTTGTAGATAATAACCGTAATCTACAACATGATTTAAATGAAGAATTATTGACCTCTATAGATCT
TAACCATCACTACGGTTCTATGAAATTACAACGTTTTGGAAAAAAACAAAATAGTATTATTTTTCAAGGTAGTTCTGGAC
TACCCATCGAGTCGAATGGCAGTTTTATCTATTGTTCTTATGACCAGCTTAAAAACTTTAAATTAATTCTTAGCAAAATG
GGACATGTGCGCTTAGAAGAGCTTAAAAATTGTTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| fimT | Acinetobacter baylyi ADP1 |
43.976 |
97.076 |
0.427 |